Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 MTND2P2-201ENST00000434633 945 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 GSTM5P1-201ENST00000434751 660 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC012075.1-201ENST00000436549 580 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.78□□□□□ -1.48
FOXN3O00409 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 YWHAEP1-201ENST00000453697 763 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 RANP1-206ENST00000455094 651 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC058823.1-201ENST00000485315 474 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 HMGB1P44-201ENST00000508597 572 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 HPRT1P1-201ENST00000509498 657 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC108471.1-201ENST00000513977 287 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 SCARNA16.4-201ENST00000516956 187 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 RN7SKP99-201ENST00000517028 307 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 FTH1P11-201ENST00000517577 551 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 CDC42P3-201ENST00000518493 633 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.78□□□□□ -1.48
FOXN3O00409 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC008521.2-201ENST00000591021 259 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 AP002906.1-201ENST00000603405 233 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AL137072.1-201ENST00000603444 466 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC112220.2-201ENST00000605513 533 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AC013244.3-201ENST00000605614 388 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 RNA5SP440-201ENST00000612665 119 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 AP003400.3-201ENST00000624904 346 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 CASC19-284ENST00000642142 1868 ntBASIC5.78□□□□□ -1.48
FOXN3O00409 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.78□□□□□ -1.48
FOXN3O00409 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
FOXN3O00409 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
FOXN3O00409 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
FOXN3O00409 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
FOXN3O00409 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.78□□□□□ -1.48
FOXN3O00409 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
FOXN3O00409 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.77□□□□□ -1.49
FOXN3O00409 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
FOXN3O00409 SNORA5.1-201ENST00000384275 131 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 DNAJC19P6-201ENST00000401853 280 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AL133388.1-201ENST00000404509 287 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 OR4K12P-201ENST00000406538 961 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 OSTCP5-201ENST00000425293 453 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 RPS29P14-201ENST00000431518 171 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC016772.1-201ENST00000444170 1261 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AL161636.2-201ENST00000445179 927 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AL589765.3-201ENST00000446084 462 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC105399.1-202ENST00000447303 205 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 NPM1P39-201ENST00000449818 867 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AL672138.1-201ENST00000450604 1015 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.77□□□□□ -1.49
FOXN3O00409 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 RPL15P21-201ENST00000495592 567 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC090638.1-201ENST00000498296 909 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC026407.1-201ENST00000518369 204 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 ATP5F1P7-201ENST00000567330 760 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
FOXN3O00409 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
FOXN3O00409 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
FOXN3O00409 RN7SL356P-201ENST00000582228 248 ntBASIC5.77□□□□□ -1.49
FOXN3O00409 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.77□□□□□ -1.49
FOXN3O00409 AL445435.1-201ENST00000604232 665 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms