Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 OR7E128P-201ENST00000532736 1024 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC099786.3-201ENST00000565735 1410 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 PCNAP1-202ENST00000595299 752 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC011445.2-201ENST00000599274 173 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 VN1R9P-201ENST00000614184 867 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC079416.3-201ENST00000624479 549 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC004817.4-201ENST00000602396 3625 ntBASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.44□□□□□ -1.54
TCRBV5S1A1TA0A578 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 RPL21P67-201ENST00000402896 478 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC010099.3-201ENST00000423896 409 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC092647.3-201ENST00000443044 633 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 RPS4XP1-201ENST00000482189 787 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 RPS21P4-201ENST00000487122 248 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AP000563.1-201ENST00000490865 758 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ATP5LP3-201ENST00000514223 304 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC106734.1-201ENST00000568646 663 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 MIR3176-201ENST00000582210 90 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 BMS1P7-201ENST00000602440 1052 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 MIR6837-201ENST00000620884 64 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC068137.4-201ENST00000638485 296 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 AC132825.1-201ENST00000463573 2247 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 HSPD1P11-201ENST00000508643 1702 ntBASIC5.43□□□□□ -1.54
TCRBV5S1A1TA0A578 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 MTND4P8-201ENST00000514997 1362 ntBASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 OR9K1P-201ENST00000326513 941 ntBASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 RNA5SP223-201ENST00000365174 120 ntBASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 HMGB1P10-201ENST00000395823 563 ntBASIC5.42□□□□□ -1.54
TCRBV5S1A1TA0A578 AC007068.1-201ENST00000396690 844 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms