Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC093909.5-201ENST00000621839 1799 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC092435.4-201ENST00000623012 4159 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AL672167.1-205ENST00000641112 3080 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RNU1-108P-201ENST00000362556 161 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RNA5SP507-201ENST00000363603 121 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 MIR765-201ENST00000390226 114 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 SEPT7P8-201ENST00000413308 775 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC092162.1-201ENST00000432828 434 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 MTND6P18-201ENST00000439477 513 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RPS26P2-201ENST00000440331 348 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC073850.1-201ENST00000449243 255 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 MYO5BP2-201ENST00000449815 1277 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SL517P-201ENST00000462240 305 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC026348.1-201ENST00000462549 1053 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SL799P-201ENST00000475891 298 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SL817P-201ENST00000480777 288 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 RPSAP50-201ENST00000481955 852 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 SCARNA21.2-201ENST00000516600 166 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 Y_RNA.719-201ENST00000517156 106 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 MIR4691-201ENST00000583764 85 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 IMMP1LP1-201ENST00000605170 488 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 EIF3FP1-201ENST00000613970 806 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AL353662.3-201ENST00000625131 237 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC138627.1-204ENST00000641894 765 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 AC087190.4-201ENST00000574616 8334 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HLA-DRB4X5D2U9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 RNA5SP305-201ENST00000362665 119 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 RNA5SP428-201ENST00000365129 132 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 MIR323B-201ENST00000385269 82 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AP002530.1-201ENST00000405705 684 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 QRSL1P2-201ENST00000418582 964 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 PDSS1P1-201ENST00000422953 1114 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 CKS1BP6-201ENST00000424932 240 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC073052.1-201ENST00000440417 714 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC092647.3-201ENST00000443044 633 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 Z80107.2-201ENST00000445127 392 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 NPM1P39-201ENST00000449818 867 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 BX284632.1-201ENST00000478218 541 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 RN7SL319P-201ENST00000480656 221 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC090142.2-201ENST00000483263 416 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 AC116562.1-201ENST00000485355 781 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 OR2A3P-201ENST00000493774 953 ntBASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.67□□□□□ -1.82
HLA-DRB4X5D2U9 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms