Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 NMD3P1-201ENST00000439704 1488 ntBASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 AC024560.2-201ENST00000507981 1497 ntBASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.98□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 RNA5SP301-201ENST00000362537 121 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 RNU6-777P-201ENST00000364265 104 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 Z97832.1-201ENST00000402490 328 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC127391.1-201ENST00000411737 98 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR9R1P-201ENST00000412200 877 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 MTND2P23-201ENST00000422990 651 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 GSTA6P-201ENST00000424144 582 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR51AB1P-201ENST00000429046 620 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 DYNLL1P7-201ENST00000429273 258 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 FDPSP8-201ENST00000438304 1089 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 RPL7P14-201ENST00000449851 741 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC016489.1-201ENST00000461109 375 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 RN7SL228P-201ENST00000470060 303 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR7E163P-201ENST00000505943 894 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 PHBP17-201ENST00000528576 541 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC090515.3-201ENST00000560431 315 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC068790.5-201ENST00000602741 355 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AL133173.2-201ENST00000614270 90 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 CDY7P-201ENST00000429883 1604 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC079178.2-201ENST00000439323 1624 ntBASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
PCDHGA11Q9Y5H2 AC096992.2-201ENST00000609553 1684 ntBASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 AL157713.1-201ENST00000379752 1531 ntBASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 AP000473.2-201ENST00000602659 1537 ntBASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.96□□□□□ -1.29
PCDHGA11Q9Y5H2 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 AL049647.1-201ENST00000319682 1789 ntTSL 2 BASIC6.96□□□□□ -1.3
PCDHGA11Q9Y5H2 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms