Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 RNA5SP91-201ENST00000390902 119 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC108075.1-201ENST00000424692 529 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AL160175.1-201ENST00000428124 247 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 MTND2P5-201ENST00000432656 1006 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AL031313.1-201ENST00000448435 256 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 SNORD11.1-201ENST00000459482 85 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC020779.1-201ENST00000478757 796 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SL826P-201ENST00000479724 288 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 OR11I1P-201ENST00000486033 954 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC093270.2-201ENST00000486157 792 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 PDCL3P4-201ENST00000489621 720 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 HMGB1P44-201ENST00000508597 572 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AP006245.2-201ENST00000522004 300 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC087888.1-201ENST00000550884 1254 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC009852.2-201ENST00000567898 485 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC234772.3-201ENST00000602277 528 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC022022.2-201ENST00000602989 360 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 HIRAP1-201ENST00000605318 787 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC009163.6-201ENST00000612367 342 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 MTND2P41-201ENST00000637599 773 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AC132825.7-201ENST00000638744 335 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 AL356317.1-201ENST00000396110 1436 ntBASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SSX2IPQ9Y2D8 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 ZNF29P-201ENST00000225587 168 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 TAS2R15P-201ENST00000390674 928 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RNA5SP339-201ENST00000390987 122 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SKP125-201ENST00000410481 302 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 SNORA79B-201ENST00000410557 148 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 BTF3P9-201ENST00000418784 283 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 BX119904.1-201ENST00000432026 348 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 MTND2P40-201ENST00000436718 841 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC245047.2-201ENST00000441060 530 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AL672138.1-201ENST00000450604 1015 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 TPT1P1-201ENST00000458495 518 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RPS4XP12-201ENST00000461747 709 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RPL7AP6-201ENST00000477943 801 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 RN7SL97P-201ENST00000486780 299 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 HMGB1P38-201ENST00000490557 577 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC008953.1-201ENST00000497334 318 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC010627.1-201ENST00000503819 1294 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 SNRPCP2-201ENST00000504370 475 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC020699.1-201ENST00000505161 445 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AL132857.1-201ENST00000555180 708 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 AC010735.1-201ENST00000567305 1026 ntBASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.87□□□□□ -1.47
SSX2IPQ9Y2D8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms