Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 RPL21P65-201ENST00000406094 466 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 NACAP7-201ENST00000407371 609 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 VN1R21P-201ENST00000426703 765 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC053481.1-201ENST00000467217 306 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC020893.1-201ENST00000502452 580 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL359715.3-201ENST00000569267 2123 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL137003.2-201ENST00000606924 2538 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 RPL7P4-203ENST00000430239 730 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 IGBP1P4-201ENST00000503202 879 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 CYP4F27P-201ENST00000514557 494 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 YPEL5P2-201ENST00000605553 359 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 MIR6867-201ENST00000610636 67 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC011379.1-201ENST00000508713 3025 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 MIR449A-201ENST00000362113 91 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 RN7SL271P-201ENST00000487601 295 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL031595.2-201ENST00000624215 19071 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL596211.1-201ENST00000569873 2277 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 OR2M4-202ENST00000641868 5934 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SDHCP2-201ENST00000398565 501 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 HNRNPA1P29-201ENST00000426409 879 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 NFYAP1-201ENST00000431953 972 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 BTF3P10-201ENST00000433415 495 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 NDUFA5P1-201ENST00000433858 341 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC110801.1-201ENST00000623590 212 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL513477.1-202ENST00000417061 214 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC091390.2-201ENST00000432573 374 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 VN1R78P-201ENST00000597393 564 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AC135507.2-201ENST00000612443 309 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL590240.3-201ENST00000621416 943 ntBASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
MACF1Q9UPN3 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms