Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UGT2B25P-201ENST00000511504 1586 ntBASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.07□□□□□ -1.28
CUEDC1Q9NWM3 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 GALNTL5-206ENST00000431418 1678 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RNU6-1309P-201ENST00000363305 108 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC090114.1-201ENST00000393266 448 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 TXNP7-201ENST00000406296 293 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RN7SKP59-201ENST00000410520 314 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RN7SKP240-201ENST00000410583 375 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RNU2-42P-201ENST00000410697 113 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC127537.1-201ENST00000418183 748 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 EIF4A1P2-201ENST00000422633 1220 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC009362.1-201ENST00000427253 406 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC105052.2-201ENST00000434317 794 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SEPT14P3-201ENST00000439401 183 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 HSPE1P28-201ENST00000443139 211 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 GTF2F2P2-201ENST00000445825 721 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AL732372.2-207ENST00000445840 183 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC079448.1-201ENST00000449377 373 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SEPT14P2-201ENST00000453405 183 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC110749.1-201ENST00000462007 357 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC040975.1-201ENST00000472104 316 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL152P-201ENST00000484176 298 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 RN7SL649P-201ENST00000496974 275 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC114981.1-201ENST00000503897 678 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 KCTD9P2-201ENST00000512203 1013 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SEPT14P4-201ENST00000513445 186 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ST13P6-201ENST00000522430 1102 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 FO082796.1-201ENST00000523795 183 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC090424.1-201ENST00000535243 736 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC125612.1-201ENST00000547580 377 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC112187.2-201ENST00000604345 283 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC016925.2-201ENST00000605108 242 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC090948.1-201ENST00000607464 549 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 MIR6813-201ENST00000621638 56 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 PISRT1-201ENST00000626175 531 ntBASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
CUEDC1Q9NWM3 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 AC018688.1-201ENST00000636528 1754 ntBASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 AC015689.2-201ENST00000528172 1738 ntBASIC7.05□□□□□ -1.28
CUEDC1Q9NWM3 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms