Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 OR13Z1P-201ENST00000416141 834 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 BMS1P17-202ENST00000416720 316 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC019050.1-201ENST00000418508 492 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 ARL4AP3-201ENST00000441452 574 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RHEBP2-201ENST00000450289 600 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 MTND3P6-201ENST00000485242 339 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC005912.1-201ENST00000495392 255 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RNU6-491P-201ENST00000516099 110 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RNU6-941P-201ENST00000516346 108 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RN7SKP183-201ENST00000517169 324 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC104997.1-201ENST00000519761 717 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC022387.2-201ENST00000604050 448 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC234782.5-201ENST00000617723 324 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AC135068.12-201ENST00000637370 931 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 SSXP3-201ENST00000442971 1300 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 Z95327.2-201ENST00000414579 1873 ntBASIC3.33□□□□□ -1.88
SND1-IT1Q9HBX3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 OR13C1P-202ENST00000641378 2919 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC087190.4-201ENST00000574616 8334 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 IL6STP1-201ENST00000346911 1020 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 RN7SKP113-201ENST00000363891 295 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 SNORA2.3-201ENST00000383920 135 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AL512422.1-201ENST00000407033 553 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 RNA5SP498-201ENST00000411342 120 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC009237.10-201ENST00000414112 510 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 EIF4HP2-201ENST00000424380 563 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC104843.2-201ENST00000427666 297 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 UBE2V2P3-201ENST00000433562 437 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 CLNS1AP1-201ENST00000435954 682 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 MTCYBP12-201ENST00000440559 1134 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 HMGB3P9-201ENST00000441799 583 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC073587.1-201ENST00000447093 876 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AP000942.1-201ENST00000463969 747 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 PPIAP21-201ENST00000464473 501 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 PCNAP1-201ENST00000505363 709 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 PGBD4P4-201ENST00000509673 613 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC108120.2-201ENST00000512973 294 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC084757.1-201ENST00000559987 490 ntBASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.32□□□□□ -1.88
SND1-IT1Q9HBX3 AC090312.1-201ENST00000580637 348 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms