Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RNU5F-7P-201ENST00000363696 115 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RNU6-707P-201ENST00000364647 95 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MT-TL1-201ENST00000386347 75 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 BTF3L4P3-201ENST00000418879 476 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RPS26P13-201ENST00000419030 330 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RNGTTP1-201ENST00000420965 728 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RPL34P27-201ENST00000428810 349 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MRPS21P3-201ENST00000436696 262 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC079776.3-201ENST00000450665 370 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RPL23AP35-201ENST00000451906 501 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 OR6C5P-201ENST00000452388 923 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC105252.1-201ENST00000503089 286 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC113367.2-201ENST00000505749 160 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC093816.1-201ENST00000515076 913 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 CYCSP25-201ENST00000525280 316 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 ATP5F1P7-201ENST00000567330 760 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 MTCO2P22-201ENST00000603246 681 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AL049634.3-201ENST00000604968 457 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AL359091.2-201ENST00000609303 556 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 uc_338.29-201ENST00000615099 168 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC069209.1-201ENST00000619282 651 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 AC073862.4-201ENST00000622982 854 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 FRG1KP-201ENST00000623592 341 ntBASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SSBP3Q9BWW4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 LINC01613-201ENST00000561476 2780 ntBASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 EEF1A1P12-201ENST00000443590 1346 ntBASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 AC034229.2-201ENST00000566945 2508 ntBASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 PPBPP2-201ENST00000513150 1362 ntBASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.4□□□□□ -1.55
SSBP3Q9BWW4 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AC105114.1-201ENST00000624795 1862 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 Y_RNA.38-201ENST00000362617 102 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 SNORA4.1-201ENST00000364263 144 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AL391419.1-201ENST00000398901 1275 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 RPS20P15-201ENST00000412792 311 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AL713922.1-201ENST00000416477 747 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AF228730.4-201ENST00000421457 183 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 NANOGP4-201ENST00000427230 913 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AC083862.1-201ENST00000427378 1242 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 MTND4LP10-201ENST00000435146 291 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AC097499.1-201ENST00000444277 208 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 TIMM8BP2-201ENST00000445940 251 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 DPPA3P1-201ENST00000448050 469 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 PSPHP1-201ENST00000450062 261 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AL139156.3-201ENST00000454802 394 ntBASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.39□□□□□ -1.55
SSBP3Q9BWW4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms