Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 YWHAEP1-201ENST00000453697 763 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RPS23P6-201ENST00000466136 431 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 SETP6-201ENST00000479329 568 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC012123.2-201ENST00000485809 248 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC009120.1-201ENST00000493458 473 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 PCNAP1-201ENST00000505363 709 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC092593.2-201ENST00000513866 913 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AP005205.1-201ENST00000563503 508 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC023813.2-201ENST00000564321 469 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RSL24D1P11-201ENST00000591045 491 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 VN1R88P-201ENST00000596787 292 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC125494.2-201ENST00000602431 657 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 QTRT1P1-201ENST00000604344 1078 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 RN7SL787P-201ENST00000613000 284 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AC093875.1-201ENST00000623688 504 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 UOX-205ENST00000640983 544 ntTSL 4 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AP004607.3-201ENST00000530354 3915 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 CPS1-IT1-201ENST00000628368 2306 ntBASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
CDK5RAP1Q96SZ6 KARSP3-201ENST00000571212 1504 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC012020.1-201ENST00000624541 1728 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL159987.1-201ENST00000347911 293 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RPS3AP37-201ENST00000419176 745 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL365203.2-201ENST00000423444 196 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 MRPS21P2-201ENST00000424704 264 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL591503.2-201ENST00000442314 1005 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL450996.1-201ENST00000445574 1202 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 PTENP1-201ENST00000447117 1215 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RPL7P45-201ENST00000455851 743 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC004129.2-201ENST00000457229 287 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU7-157P-201ENST00000459600 66 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC005410.1-202ENST00000460347 485 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 CBX1P5-201ENST00000475330 559 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RN7SL717P-201ENST00000478343 297 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC008565.1-201ENST00000509046 885 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC106872.4-201ENST00000510050 523 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU6-491P-201ENST00000516099 110 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC139365.2-201ENST00000517972 253 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC078899.1-201ENST00000521432 1185 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC022404.1-201ENST00000555320 273 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL049872.1-201ENST00000556323 322 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC096996.1-201ENST00000563813 325 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC006362.1-201ENST00000567392 174 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC090286.3-201ENST00000573133 187 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 CBX3P2-202ENST00000583365 535 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 MIR4719-201ENST00000585233 84 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC010738.1-201ENST00000604970 987 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 RNU6-84P-201ENST00000607737 102 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AC024257.5-201ENST00000612739 531 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL359513.1-201ENST00000614364 557 ntBASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.99□□□□□ -1.45
CDK5RAP1Q96SZ6 AL590410.1-201ENST00000617925 333 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms