Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AC245100.2-201ENST00000454544 1679 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC092447.10-201ENST00000620607 1652 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
HLA-CQ95604 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 RNA5SP308-201ENST00000362532 115 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 RN7SKP6-201ENST00000364795 319 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 CNN3P1-201ENST00000401596 935 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 RNU2-28P-201ENST00000410457 189 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 CBX1P3-201ENST00000413296 527 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC127526.1-201ENST00000417526 366 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AL451054.2-201ENST00000420896 202 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC233981.1-201ENST00000423224 461 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 ATP5A1P8-201ENST00000423669 1291 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 USP9YP16-201ENST00000430287 407 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 USP9YP23-201ENST00000455085 407 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 RNU7-136P-201ENST00000458819 69 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC007547.1-201ENST00000462177 490 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 RPL7P6-201ENST00000480903 738 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 EIF4EP3-201ENST00000498782 656 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 MTCO2P24-201ENST00000515611 426 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AL162632.2-201ENST00000553933 399 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC026458.1-201ENST00000564330 438 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 EEF1B2P1-201ENST00000567221 672 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AC007255.2-201ENST00000604053 631 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AC092807.2-201ENST00000609367 243 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
HLA-CQ95604 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 AC111152.1-202ENST00000635848 339 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
HLA-CQ95604 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 R3HDM2P1-201ENST00000505381 1960 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 DDX18P4-201ENST00000511690 1966 ntBASIC7.55□□□□□ -1.2
HLA-CQ95604 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
HLA-CQ95604 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC7.55□□□□□ -1.2
HLA-CQ95604 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC7.55□□□□□ -1.2
HLA-CQ95604 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-CQ95604 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-CQ95604 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 OR2A4-201ENST00000315453 1758 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HLA-CQ95604 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-CQ95604 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HLA-CQ95604 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
HLA-CQ95604 Y_RNA.255-201ENST00000364581 97 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 SNORA20.2-201ENST00000383922 131 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
HLA-CQ95604 AL603908.1-201ENST00000406098 201 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 RNU6-272P-201ENST00000411028 104 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 UQCRBP1-201ENST00000421129 336 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 RGS17P1-201ENST00000423358 553 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-CQ95604 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.54□□□□□ -1.2
HLA-CQ95604 RPS3AP38-201ENST00000435889 763 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AC004980.3-201ENST00000447046 365 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AL356010.1-201ENST00000456364 102 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 RPL37P3-201ENST00000456825 293 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 RNU7-27P-201ENST00000459281 62 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 RPL7P15-201ENST00000461190 712 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AC040975.1-201ENST00000472104 316 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-CQ95604 AL161747.1-201ENST00000480068 358 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-CQ95604 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-CQ95604 COX6CP5-201ENST00000527162 228 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AC084121.1-201ENST00000533882 835 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC7.54□□□□□ -1.2
HLA-CQ95604 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.54□□□□□ -1.2
HLA-CQ95604 AC026470.2-201ENST00000561492 181 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 AC090751.1-201ENST00000566966 267 ntBASIC7.54□□□□□ -1.2
HLA-CQ95604 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms