Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 CTSL3P-202ENST00000412179 788 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 VN2R3P-201ENST00000422626 1412 ntBASIC3.18□□□□□ -1.9
ALMS1Q8TCU4 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RNA5SP223-201ENST00000365174 120 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RPS26P8-201ENST00000393490 348 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC079809.1-201ENST00000415468 276 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC090018.1-201ENST00000434369 367 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 TAAR4P-201ENST00000454843 1039 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC087499.8-201ENST00000578406 226 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC106871.1-201ENST00000568324 3102 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 FTH1P16-201ENST00000435241 552 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC108064.1-201ENST00000513791 460 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 MTCYBP13-201ENST00000578634 1093 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 ZNF137P-201ENST00000456718 1920 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC123769.2-201ENST00000624332 5984 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 NPM1P18-201ENST00000434232 732 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RNU1-6P-201ENST00000516290 144 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 TLK1P1-201ENST00000456760 2440 ntBASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ALMS1Q8TCU4 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 OR51H2P-202ENST00000641424 3046 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SPRR2C-201ENST00000290702 219 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 OR8Q1P-201ENST00000526467 655 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC244100.1-202ENST00000621554 382 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 AC005261.4-201ENST00000600047 1385 ntBASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ALMS1Q8TCU4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms