Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 NANOGP4-201ENST00000427230 913 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 MTND6P12-201ENST00000428247 522 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 FO393414.1-201ENST00000428697 1184 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 RPL12P17-201ENST00000432393 498 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 GSTM5P1-201ENST00000434751 660 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 NPM1P33-201ENST00000438918 872 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SNRPFP2-201ENST00000440710 251 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 CYCSP20-201ENST00000473154 315 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 RPS17P11-201ENST00000474297 293 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AP000797.2-201ENST00000475768 606 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 METTL15P1-201ENST00000481421 1045 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC058823.1-201ENST00000485315 474 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 RPL15P21-201ENST00000495592 567 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC020699.1-201ENST00000505161 445 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 IMPA1P1-201ENST00000510718 842 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC074087.1-201ENST00000512059 724 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SNORA19.3-201ENST00000516165 130 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SCARNA16.4-201ENST00000516956 187 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 RN7SKP99-201ENST00000517028 307 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 PRPF19P1-201ENST00000584766 898 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC234772.3-201ENST00000602277 528 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC005034.4-201ENST00000603612 899 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AL159169.2-201ENST00000610061 1269 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC006963.1-201ENST00000624003 1052 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC019226.2-201ENST00000625973 424 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CLIP4Q8N3C7 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC079298.1-201ENST00000625026 1619 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC100778.3-201ENST00000580060 1750 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC011503.2-201ENST00000594230 1500 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 TAF9BP2-201ENST00000400856 499 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 TATDN1P1-201ENST00000414123 891 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 GLUD1P9-201ENST00000420997 1173 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 HSPD1P12-201ENST00000429127 1069 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 RPL23AP19-201ENST00000436229 369 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AL390119.1-201ENST00000440329 312 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 Z77249.1-201ENST00000444622 1175 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AL672138.1-201ENST00000450604 1015 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 EIF1P7-201ENST00000487533 337 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC010627.1-201ENST00000503819 1294 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 HMGB1P44-201ENST00000508597 572 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC112191.2-201ENST00000522428 333 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 DUXAP5-201ENST00000529668 529 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC023538.1-201ENST00000534576 736 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 OR8K4P-201ENST00000534608 872 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC087888.1-201ENST00000550884 1254 ntBASIC4.94□□□□□ -1.62
CLIP4Q8N3C7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms