Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPS27P20-201ENST00000492051 246 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC010493.1-201ENST00000513479 292 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 RNU6-1045P-201ENST00000516321 107 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 SNORA48.10-201ENST00000516965 160 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL512310.1-201ENST00000548639 172 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC008126.1-201ENST00000549019 480 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL390334.1-201ENST00000556395 450 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 EEF1B2P1-201ENST00000567221 672 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC025678.1-201ENST00000567861 338 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 ZNF322P1-201ENST00000568013 1209 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 BNIP3P23-201ENST00000599655 511 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL161729.3-201ENST00000603533 673 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC097381.3-201ENST00000608962 462 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC138305.3-201ENST00000624988 240 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC110994.2-201ENST00000635481 492 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 HSPA8P17-201ENST00000427029 1382 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 AC079097.1-201ENST00000512187 1399 ntBASIC7.4□□□□□ -1.22
RNF135Q8IUD6 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.4□□□□□ -1.22
RNF135Q8IUD6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
RNF135Q8IUD6 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL359396.1-201ENST00000623151 2376 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 RNU6-1085P-201ENST00000363576 107 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 Y_RNA.409-201ENST00000383990 98 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 Y_RNA.529-201ENST00000384586 119 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL450338.1-201ENST00000407987 512 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL596448.1-201ENST00000415024 392 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 VDAC1P2-201ENST00000423609 850 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC127526.2-201ENST00000426436 775 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC005534.2-201ENST00000431047 433 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 PSMD10P2-201ENST00000432890 672 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 RPS7P5-201ENST00000441482 581 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 RAD23BP3-201ENST00000454157 1152 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 BX323845.2-201ENST00000458382 234 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC135721.2-201ENST00000464237 300 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 RN7SL214P-201ENST00000487317 265 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 Y_RNA.693-201ENST00000516641 110 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 IGLC4-201ENST00000517690 248 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 IGKV2D-38-201ENST00000518423 240 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL359212.1-201ENST00000556608 614 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC093519.1-201ENST00000566109 298 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.39□□□□□ -1.23
RNF135Q8IUD6 MRPS21P9-201ENST00000571150 257 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 MIR4637-201ENST00000582405 84 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AC011891.2-201ENST00000604949 397 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 RN7SL126P-201ENST00000616400 299 ntBASIC7.39□□□□□ -1.23
RNF135Q8IUD6 AL356274.1-201ENST00000617064 410 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms