Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 AC024560.2-201ENST00000507981 1497 ntBASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
LYSMD3Q7Z3D4 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
LYSMD3Q7Z3D4 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 HSPD1P1-201ENST00000503199 1726 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RNU6-1017P-201ENST00000363613 106 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.605-201ENST00000410577 105 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SKP29-201ENST00000410957 272 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RPL36P18-201ENST00000419316 318 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 PPIAP23-201ENST00000420099 497 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC062016.2-201ENST00000420950 676 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 GAPDHP19-201ENST00000431768 1005 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 SDHCP3-201ENST00000445371 506 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL390728.3-201ENST00000452704 270 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL583843.1-201ENST00000456070 346 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 MED28P7-201ENST00000456611 530 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 GAPDHP53-201ENST00000458397 924 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 Y_RNA.639-201ENST00000458981 102 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC010307.1-201ENST00000467206 836 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RPL5P12-201ENST00000477071 851 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL163540.1-201ENST00000485382 386 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RPL21P42-201ENST00000488408 464 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CDH12P2-201ENST00000504393 298 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 MEPE-206ENST00000511670 550 ntTSL 4 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RNA5SP96-201ENST00000516041 107 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 SCARNA18.2-201ENST00000516882 84 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RN7SKP233-201ENST00000517005 110 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 OR5BK1P-201ENST00000550421 823 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC138915.2-201ENST00000569776 97 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC010463.3-201ENST00000594077 500 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC090948.1-201ENST00000607464 549 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 MIR8082-201ENST00000612488 81 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL161420.1-201ENST00000619393 264 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AC087894.3-201ENST00000623682 349 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 AL049541.2-201ENST00000626377 555 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 MROH3P-201ENST00000435735 2676 ntBASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
LYSMD3Q7Z3D4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
LYSMD3Q7Z3D4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 136.2 ms