Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.97□□□□□ -1.61
NUP54Q7Z3B4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
NUP54Q7Z3B4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
NUP54Q7Z3B4 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
NUP54Q7Z3B4 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.96□□□□□ -1.61
NUP54Q7Z3B4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AL034370.1-201ENST00000397254 1590 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC093311.1-201ENST00000506586 2021 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 MIR133B-201ENST00000362210 119 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 RNU1-77P-201ENST00000390868 162 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 HSPA8P15-201ENST00000401676 786 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 RPS27AP11-201ENST00000402798 447 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC013404.1-201ENST00000413068 249 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 RPL7L1P9-201ENST00000431298 745 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 RPSAP51-201ENST00000497462 645 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 SUMO1P1-201ENST00000497904 306 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 MTND1P36-201ENST00000522384 936 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC233266.2-201ENST00000567067 528 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC021483.2-201ENST00000567415 758 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC019322.1-201ENST00000571869 389 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC027216.1-201ENST00000577726 685 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 RN7SL356P-201ENST00000582228 248 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC133552.5-201ENST00000604266 540 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC109309.2-201ENST00000612597 332 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AL109620.1-201ENST00000618738 1197 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 AC080188.3-201ENST00000624842 748 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 CASC19-204ENST00000641001 2055 ntBASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUP54Q7Z3B4 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 DBIP1-201ENST00000401435 260 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC079809.1-201ENST00000415468 276 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 EIF2S2P3-201ENST00000428356 999 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 FAM96AP1-201ENST00000430879 482 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 RPS24P8-201ENST00000431490 402 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AP000949.1-201ENST00000438328 629 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC090804.1-201ENST00000448870 490 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 DNAJB5P1-201ENST00000454004 806 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 RPS6P2-201ENST00000454208 705 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC092691.2-201ENST00000461787 803 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC027338.1-201ENST00000514840 825 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AP004607.2-201ENST00000533949 322 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AC126177.5-201ENST00000549599 178 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL049779.2-201ENST00000553847 315 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 OR11H3P-201ENST00000554547 982 ntBASIC4.95□□□□□ -1.62
NUP54Q7Z3B4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms