Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 BPTFP1-201ENST00000579209 492 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 RN7SL230P-201ENST00000580835 303 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 MIR4472-2-201ENST00000582069 67 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC008536.1-201ENST00000602872 669 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 SMIM12P1-201ENST00000603004 274 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 PSMA6P4-201ENST00000603247 718 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AL392112.1-201ENST00000605115 829 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 Z95327.3-201ENST00000610385 572 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 Z99129.2-201ENST00000619967 314 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AP002791.1-201ENST00000623291 381 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 SGO1P1-201ENST00000603525 1447 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ASNSP1-204ENST00000641977 1664 ntBASIC5.53□□□□□ -1.52
RNF220Q5VTB9 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RNF220Q5VTB9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC130304.1-201ENST00000622942 2385 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 MIR16-1-201ENST00000385271 89 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 SNORA40.2-201ENST00000390847 128 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RN7SKP279-201ENST00000411383 298 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 NPM1P40-201ENST00000412758 733 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL035422.1-201ENST00000414193 397 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC234782.4-201ENST00000417646 1048 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC010099.3-201ENST00000423896 409 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 HIGD1AP4-201ENST00000430194 280 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 FTLP8-201ENST00000446770 267 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 MRPL35P4-201ENST00000453682 566 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC104164.1-201ENST00000460282 590 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 GAPDHP39-201ENST00000481866 979 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RPS27P20-201ENST00000492051 246 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RN7SL362P-201ENST00000494228 267 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC069366.1-201ENST00000583159 838 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC115085.1-201ENST00000588924 229 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC068790.7-201ENST00000602347 528 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC007349.4-201ENST00000608114 532 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AP005137.2-201ENST00000609238 400 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC024257.5-201ENST00000612739 531 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC024884.1-201ENST00000620583 399 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC116563.2-201ENST00000624751 535 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AL357562.1-201ENST00000624911 609 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC010329.2-201ENST00000595195 2737 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 AC022031.1-201ENST00000585985 2593 ntBASIC5.52□□□□□ -1.53
RNF220Q5VTB9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL731532.2-201ENST00000623542 1953 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms