Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RFX4Q33E94 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.5□□□□□ -1.69
RFX4Q33E94 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RFX4Q33E94 RNU1-108P-201ENST00000362556 161 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 SNORA17.1-201ENST00000362945 126 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.5□□□□□ -1.69
RFX4Q33E94 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 SCAND3P1-201ENST00000439854 1060 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.5□□□□□ -1.69
RFX4Q33E94 RN7SL174P-201ENST00000475578 289 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 RPL7P39-201ENST00000481157 744 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 RPS21P4-201ENST00000487122 248 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC010350.1-201ENST00000504908 231 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.5□□□□□ -1.69
RFX4Q33E94 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 BX510359.5-201ENST00000515651 304 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 OR4A46P-201ENST00000527255 933 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.5□□□□□ -1.69
RFX4Q33E94 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 GLRXP2-201ENST00000555594 321 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.5□□□□□ -1.69
RFX4Q33E94 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 SLC25A36P1-201ENST00000590111 465 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 AP001542.1-201ENST00000591314 200 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 AC087283.1-201ENST00000604029 1074 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC096553.1-201ENST00000605169 829 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC067838.1-201ENST00000606064 577 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC015804.1-201ENST00000622935 435 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC243960.7-201ENST00000623532 707 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 AC079298.2-201ENST00000623885 459 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 CASC19-264ENST00000641912 1184 ntBASIC4.5□□□□□ -1.69
RFX4Q33E94 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RFX4Q33E94 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RFX4Q33E94 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.5□□□□□ -1.69
RFX4Q33E94 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.49□□□□□ -1.69
RFX4Q33E94 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC104118.1-201ENST00000607625 1589 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC091046.3-201ENST00000631455 1574 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RFX4Q33E94 RNU1-43P-201ENST00000365052 165 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 AL080315.1-201ENST00000406055 466 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC013470.3-201ENST00000420252 1194 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 GTF2IP2-201ENST00000424290 697 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 KNOP1P3-201ENST00000446933 426 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.49□□□□□ -1.69
RFX4Q33E94 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 RN7SKP34-201ENST00000516142 244 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AP002981.1-201ENST00000517692 975 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 IGLVIV-64-201ENST00000518581 301 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 IGKV3D-34-201ENST00000522638 302 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.49□□□□□ -1.69
RFX4Q33E94 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 DUX4L52-201ENST00000549363 777 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 SNORA74C-1-201ENST00000580726 201 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.49□□□□□ -1.69
RFX4Q33E94 HMGB2P1-201ENST00000591146 634 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 FKBP1AP1-201ENST00000594588 318 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC130352.1-201ENST00000602979 661 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AL137072.1-201ENST00000603444 466 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC019206.1-201ENST00000621938 425 ntBASIC4.49□□□□□ -1.69
RFX4Q33E94 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.49□□□□□ -1.69
RFX4Q33E94 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
RFX4Q33E94 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RFX4Q33E94 RLIMP2-201ENST00000427891 1563 ntBASIC4.48□□□□□ -1.69
RFX4Q33E94 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms