Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 AC090602.1-201ENST00000469695 252 ntBASIC5.65□□□□□ -1.5
UBE3AQ05086 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3AQ05086 RN7SKP260-201ENST00000516907 149 ntBASIC5.65□□□□□ -1.5
UBE3AQ05086 AC012400.1-201ENST00000518452 381 ntBASIC5.65□□□□□ -1.5
UBE3AQ05086 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.65□□□□□ -1.5
UBE3AQ05086 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE3AQ05086 AC068339.2-201ENST00000534395 618 ntBASIC5.65□□□□□ -1.5
UBE3AQ05086 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.65□□□□□ -1.5
UBE3AQ05086 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
UBE3AQ05086 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3AQ05086 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.65□□□□□ -1.5
UBE3AQ05086 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.65□□□□□ -1.5
UBE3AQ05086 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.65□□□□□ -1.5
UBE3AQ05086 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.65□□□□□ -1.5
UBE3AQ05086 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.65□□□□□ -1.51
UBE3AQ05086 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3AQ05086 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
UBE3AQ05086 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3AQ05086 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3AQ05086 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3AQ05086 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
UBE3AQ05086 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.51
UBE3AQ05086 AC004158.1-201ENST00000564508 4319 ntBASIC5.65□□□□□ -1.51
UBE3AQ05086 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 OR4K17-201ENST00000315543 1032 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
UBE3AQ05086 RNVU1-6-201ENST00000364688 164 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3AQ05086 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 MIR192-201ENST00000384915 110 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 RNU6-796P-201ENST00000391086 107 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3AQ05086 RN7SKP222-201ENST00000410651 315 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC010385.1-201ENST00000412374 256 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3AQ05086 GJA6P-201ENST00000415117 1042 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC009506.2-201ENST00000420635 840 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 RPS4XP16-201ENST00000427198 791 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AL035458.1-201ENST00000433096 585 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 USP24P1-201ENST00000433802 779 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3AQ05086 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 KNOP1P3-201ENST00000446933 426 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AC009220.1-201ENST00000451614 275 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC079168.1-201ENST00000458741 345 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 RN7SL591P-201ENST00000496150 292 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3AQ05086 RNU6-1004P-201ENST00000516584 111 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 SNORA31.13-201ENST00000516624 135 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3AQ05086 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AP000859.1-201ENST00000525536 307 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC008033.2-201ENST00000542626 177 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3AQ05086 NPM1P42-201ENST00000560329 862 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.64□□□□□ -1.51
UBE3AQ05086 SS18L2P2-201ENST00000583960 235 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.64□□□□□ -1.51
UBE3AQ05086 BNIP3P27-201ENST00000599991 412 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC026741.1-201ENST00000605892 482 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC112503.2-201ENST00000609005 552 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AC099654.6-201ENST00000636487 512 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC135068.12-201ENST00000637370 931 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC073869.8-201ENST00000641806 335 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.64□□□□□ -1.51
UBE3AQ05086 AC097063.1-201ENST00000426714 1797 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
UBE3AQ05086 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
UBE3AQ05086 AC026951.1-201ENST00000559530 2459 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 AC068870.1-201ENST00000563737 2455 ntBASIC5.64□□□□□ -1.51
UBE3AQ05086 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UBE3AQ05086 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
UBE3AQ05086 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UBE3AQ05086 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UBE3AQ05086 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
UBE3AQ05086 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.63□□□□□ -1.51
UBE3AQ05086 AC006484.1-201ENST00000435086 1884 ntBASIC5.63□□□□□ -1.51
UBE3AQ05086 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms