Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CCT8P1-201ENST00000413611 1657 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 MAPK10-338ENST00000641647 3362 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC008079.2-201ENST00000623543 20396 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RNU6-249P-201ENST00000363016 102 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RNA5SP447-201ENST00000363749 119 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RN7SKP153-201ENST00000365026 316 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RNA5SP223-201ENST00000365174 120 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN6P56747 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 RPL21P108-201ENST00000413857 481 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 MTND4LP21-201ENST00000415303 295 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN6P56747 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 PTP4A1P1-201ENST00000420539 515 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC090018.1-201ENST00000434369 367 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC090804.1-201ENST00000448870 490 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.73□□□□□ -1.65
CLDN6P56747 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AP002371.1-201ENST00000463604 433 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC098583.1-201ENST00000480875 255 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AC022133.1-201ENST00000490961 571 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 MORF4L2P1-201ENST00000503761 858 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC098976.1-201ENST00000513014 541 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RNU2-30P-201ENST00000516209 141 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.73□□□□□ -1.65
CLDN6P56747 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC009852.2-201ENST00000567898 485 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC023575.1-201ENST00000580510 358 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 RN7SL690P-201ENST00000582087 240 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC138965.3-201ENST00000623875 498 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 FRG1EP-201ENST00000634469 770 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 AC092376.2-201ENST00000622621 4116 ntBASIC4.73□□□□□ -1.65
CLDN6P56747 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CLDN6P56747 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CLDN6P56747 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 DHX40P1-201ENST00000588725 1412 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CLDN6P56747 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CLDN6P56747 OR1L6-202ENST00000373684 1044 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLDN6P56747 SNORA48.4-201ENST00000391089 134 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 U3.30-201ENST00000391308 210 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 TBCAP2-201ENST00000416175 326 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 BX510359.2-201ENST00000417920 305 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AC017019.1-201ENST00000426129 261 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 RPL19P16-201ENST00000433839 588 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AC122718.1-201ENST00000439448 744 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN6P56747 EIF2S2P2-201ENST00000447161 982 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 SLC25A18P1-201ENST00000449385 454 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 FAM133DP-201ENST00000464802 691 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CLDN6P56747 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC016687.1-201ENST00000482574 353 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN6P56747 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 IGKV1-32-201ENST00000519290 311 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.72□□□□□ -1.65
CLDN6P56747 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.72□□□□□ -1.65
CLDN6P56747 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.72□□□□□ -1.65
CLDN6P56747 AC008833.1-201ENST00000611633 691 ntBASIC4.72□□□□□ -1.65
CLDN6P56747 AL022401.1-201ENST00000619498 108 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms