Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL627308.1-201ENST00000435693 821 ntBASIC4.78□□□□□ -1.64
CDH11P55287 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH11P55287 GAPDHP58-201ENST00000438477 1006 ntBASIC4.78□□□□□ -1.64
CDH11P55287 NPM1P29-201ENST00000483112 803 ntBASIC4.78□□□□□ -1.64
CDH11P55287 RN7SL591P-201ENST00000496150 292 ntBASIC4.78□□□□□ -1.64
CDH11P55287 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 AC006499.3-201ENST00000506077 748 ntBASIC4.78□□□□□ -1.64
CDH11P55287 RN7SKP34-201ENST00000516142 244 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.78□□□□□ -1.64
CDH11P55287 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH11P55287 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH11P55287 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH11P55287 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 AL512329.2-201ENST00000607350 548 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AL359513.1-201ENST00000614364 557 ntBASIC4.78□□□□□ -1.64
CDH11P55287 MIR6719-201ENST00000622428 87 ntBASIC4.78□□□□□ -1.64
CDH11P55287 RPL23AP61-201ENST00000623642 466 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AC092159.4-201ENST00000624944 550 ntBASIC4.78□□□□□ -1.64
CDH11P55287 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 PABPC1P6-201ENST00000445594 1829 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AL359715.4-201ENST00000606629 1436 ntBASIC4.78□□□□□ -1.64
CDH11P55287 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH11P55287 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 AL731532.2-201ENST00000623542 1953 ntBASIC4.78□□□□□ -1.64
CDH11P55287 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH11P55287 HSPA8P19-201ENST00000505359 1517 ntBASIC4.77□□□□□ -1.65
CDH11P55287 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDH11P55287 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 SNORA74A-201ENST00000364089 198 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AL133325.1-201ENST00000421090 382 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AL354692.1-201ENST00000423044 315 ntBASIC4.77□□□□□ -1.65
CDH11P55287 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 RPL7L1P9-201ENST00000431298 745 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.77□□□□□ -1.65
CDH11P55287 RPS4XP1-201ENST00000482189 787 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.77□□□□□ -1.65
CDH11P55287 MTATP6P9-201ENST00000515039 680 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AP006245.2-201ENST00000522004 300 ntBASIC4.77□□□□□ -1.65
CDH11P55287 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDH11P55287 AC004923.2-201ENST00000529649 369 ntBASIC4.77□□□□□ -1.65
CDH11P55287 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 OR10G5P-201ENST00000532733 358 ntBASIC4.77□□□□□ -1.65
CDH11P55287 UBTFL9-201ENST00000534504 1148 ntBASIC4.77□□□□□ -1.65
CDH11P55287 OSBPL9P3-201ENST00000534523 595 ntBASIC4.77□□□□□ -1.65
CDH11P55287 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 AC093510.2-201ENST00000562820 896 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 MIR4472-2-201ENST00000582069 67 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.77□□□□□ -1.65
CDH11P55287 AF230666.2-201ENST00000602328 725 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AC011626.1-201ENST00000604710 562 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AL391834.2-201ENST00000609982 546 ntBASIC4.77□□□□□ -1.65
CDH11P55287 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 AC016957.2-201ENST00000616998 848 ntBASIC4.77□□□□□ -1.65
CDH11P55287 AP000648.2-201ENST00000624182 404 ntBASIC4.77□□□□□ -1.65
CDH11P55287 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 AC136428.4-201ENST00000634254 1155 ntBASIC4.77□□□□□ -1.65
CDH11P55287 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 FRG1DP-201ENST00000635586 771 ntBASIC4.77□□□□□ -1.65
CDH11P55287 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 AC021242.1-201ENST00000507315 2035 ntBASIC4.77□□□□□ -1.65
CDH11P55287 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDH11P55287 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.77□□□□□ -1.65
CDH11P55287 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 AC063976.2-201ENST00000425667 3556 ntBASIC4.76□□□□□ -1.65
CDH11P55287 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH11P55287 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH11P55287 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 RNU6-31P-201ENST00000384388 108 ntBASIC4.76□□□□□ -1.65
CDH11P55287 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH11P55287 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH11P55287 MTCYBP7-201ENST00000419540 1134 ntBASIC4.76□□□□□ -1.65
CDH11P55287 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms