Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR8069-2-201ENST00000621412 86 ntBASIC5.01□□□□□ -1.61
CDH6P55285 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.01□□□□□ -1.61
CDH6P55285 INTS6P1-201ENST00000504674 2530 ntBASIC5.01□□□□□ -1.61
CDH6P55285 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 AL731566.1-201ENST00000620490 1937 ntBASIC5.01□□□□□ -1.61
CDH6P55285 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CDH6P55285 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CDH6P55285 AL672167.1-205ENST00000641112 3080 ntBASIC5□□□□□ -1.61
CDH6P55285 SALL4P2-201ENST00000423288 2910 ntBASIC5□□□□□ -1.61
CDH6P55285 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 ZNF652P1-201ENST00000442420 1309 ntBASIC5□□□□□ -1.61
CDH6P55285 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5□□□□□ -1.61
CDH6P55285 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5□□□□□ -1.61
CDH6P55285 AL359922.3-201ENST00000624779 1670 ntBASIC5□□□□□ -1.61
CDH6P55285 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 AC097461.1-201ENST00000568928 2821 ntBASIC5□□□□□ -1.61
CDH6P55285 MGP-201ENST00000228938 694 ntTSL 3 BASIC5□□□□□ -1.61
CDH6P55285 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 RNA5SP123-201ENST00000363244 119 ntBASIC5□□□□□ -1.61
CDH6P55285 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5□□□□□ -1.61
CDH6P55285 AC005522.1-201ENST00000395416 346 ntBASIC5□□□□□ -1.61
CDH6P55285 HMGB3P7-201ENST00000400214 611 ntBASIC5□□□□□ -1.61
CDH6P55285 AL589647.1-201ENST00000402485 466 ntBASIC5□□□□□ -1.61
CDH6P55285 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 RPL12P43-201ENST00000420608 499 ntBASIC5□□□□□ -1.61
CDH6P55285 NFYAP1-201ENST00000431953 972 ntBASIC5□□□□□ -1.61
CDH6P55285 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5□□□□□ -1.61
CDH6P55285 AC234781.3-201ENST00000452540 973 ntBASIC5□□□□□ -1.61
CDH6P55285 RPL5P16-201ENST00000471467 790 ntBASIC5□□□□□ -1.61
CDH6P55285 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5□□□□□ -1.61
CDH6P55285 GCSHP4-201ENST00000538792 439 ntBASIC5□□□□□ -1.61
CDH6P55285 AL121839.1-201ENST00000556233 1185 ntBASIC5□□□□□ -1.61
CDH6P55285 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5□□□□□ -1.61
CDH6P55285 AC044860.2-201ENST00000561005 179 ntBASIC5□□□□□ -1.61
CDH6P55285 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5□□□□□ -1.61
CDH6P55285 AC016180.1-201ENST00000567945 403 ntBASIC5□□□□□ -1.61
CDH6P55285 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
CDH6P55285 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5□□□□□ -1.61
CDH6P55285 AC011453.2-201ENST00000603737 729 ntBASIC5□□□□□ -1.61
CDH6P55285 AC211433.2-201ENST00000608433 387 ntBASIC5□□□□□ -1.61
CDH6P55285 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5□□□□□ -1.61
CDH6P55285 AC007497.1-201ENST00000610421 561 ntBASIC5□□□□□ -1.61
CDH6P55285 AC015804.1-201ENST00000622935 435 ntBASIC5□□□□□ -1.61
CDH6P55285 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDH6P55285 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CDH6P55285 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDH6P55285 TLK1P1-201ENST00000456760 2440 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AC233968.1-201ENST00000611212 1300 ntBASIC4.99□□□□□ -1.61
CDH6P55285 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH6P55285 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH6P55285 RN7SKP104-201ENST00000362605 328 ntBASIC4.99□□□□□ -1.61
CDH6P55285 RNU6-1331P-201ENST00000363658 106 ntBASIC4.99□□□□□ -1.61
CDH6P55285 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH6P55285 RNU6-729P-201ENST00000384399 107 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH6P55285 SEPT7P8-201ENST00000413308 775 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH6P55285 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH6P55285 AC106901.1-201ENST00000425086 698 ntBASIC4.99□□□□□ -1.61
CDH6P55285 NMNAT1P2-201ENST00000435192 860 ntBASIC4.99□□□□□ -1.61
CDH6P55285 PTMAP6-201ENST00000439110 327 ntBASIC4.99□□□□□ -1.61
CDH6P55285 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH6P55285 RBMY2TP-201ENST00000451162 947 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AP000942.1-201ENST00000463969 747 ntBASIC4.99□□□□□ -1.61
CDH6P55285 RN7SL329P-201ENST00000467740 299 ntBASIC4.99□□□□□ -1.61
CDH6P55285 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 AC110775.1-201ENST00000513721 462 ntBASIC4.99□□□□□ -1.61
CDH6P55285 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH6P55285 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH6P55285 OR5AZ1P-201ENST00000527448 943 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 AP000676.2-201ENST00000529711 301 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AP001804.2-201ENST00000533932 910 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH6P55285 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
CDH6P55285 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH6P55285 NPM1P45-201ENST00000583151 559 ntBASIC4.99□□□□□ -1.61
CDH6P55285 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 MIR6719-201ENST00000622428 87 ntBASIC4.99□□□□□ -1.61
CDH6P55285 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH6P55285 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH6P55285 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms