Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC4P35249 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC4P35249 RNU1-82P-201ENST00000390851 165 ntBASIC6.05□□□□□ -1.44
RFC4P35249 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC4P35249 RN7SKP267-201ENST00000410381 285 ntBASIC6.05□□□□□ -1.44
RFC4P35249 AC140479.3-201ENST00000418944 1126 ntBASIC6.05□□□□□ -1.44
RFC4P35249 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC4P35249 RPS17P8-201ENST00000434525 335 ntBASIC6.05□□□□□ -1.44
RFC4P35249 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC4P35249 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC4P35249 AC026782.2-201ENST00000510845 636 ntBASIC6.05□□□□□ -1.44
RFC4P35249 HMGB1P23-201ENST00000518743 568 ntBASIC6.05□□□□□ -1.44
RFC4P35249 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC4P35249 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.05□□□□□ -1.44
RFC4P35249 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RFC4P35249 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.05□□□□□ -1.44
RFC4P35249 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.05□□□□□ -1.44
RFC4P35249 AC067959.1-201ENST00000604334 379 ntBASIC6.05□□□□□ -1.44
RFC4P35249 RNU6-84P-201ENST00000607737 102 ntBASIC6.05□□□□□ -1.44
RFC4P35249 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.05□□□□□ -1.44
RFC4P35249 AC015813.6-201ENST00000624409 5808 ntBASIC6.05□□□□□ -1.44
RFC4P35249 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC4P35249 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RFC4P35249 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RFC4P35249 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC4P35249 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFC4P35249 MAPK10-338ENST00000641647 3362 ntBASIC6.04□□□□□ -1.44
RFC4P35249 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC4P35249 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 AP001284.1-201ENST00000528393 2118 ntBASIC6.04□□□□□ -1.44
RFC4P35249 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 AC097063.1-201ENST00000426714 1797 ntBASIC6.04□□□□□ -1.44
RFC4P35249 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 AL591848.1-201ENST00000413092 322 ntBASIC6.04□□□□□ -1.44
RFC4P35249 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC4P35249 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC4P35249 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC4P35249 AC097523.2-201ENST00000435551 652 ntBASIC6.04□□□□□ -1.44
RFC4P35249 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC4P35249 CYCSP34-201ENST00000458172 304 ntBASIC6.04□□□□□ -1.44
RFC4P35249 RPL23AP24-201ENST00000458203 385 ntBASIC6.04□□□□□ -1.44
RFC4P35249 RN7SL817P-201ENST00000480777 288 ntBASIC6.04□□□□□ -1.44
RFC4P35249 AC093815.1-201ENST00000508637 280 ntBASIC6.04□□□□□ -1.44
RFC4P35249 ASNSP4-201ENST00000511103 447 ntBASIC6.04□□□□□ -1.44
RFC4P35249 MTCO1P35-201ENST00000515270 228 ntBASIC6.04□□□□□ -1.44
RFC4P35249 DERA-209ENST00000532964 854 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC4P35249 RN7SL290P-201ENST00000578661 300 ntBASIC6.04□□□□□ -1.44
RFC4P35249 SNORA74C-1-201ENST00000580726 201 ntBASIC6.04□□□□□ -1.44
RFC4P35249 MIR3138-201ENST00000585238 82 ntBASIC6.04□□□□□ -1.44
RFC4P35249 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 BNIP3P33-201ENST00000598912 569 ntBASIC6.04□□□□□ -1.44
RFC4P35249 AC024941.1-201ENST00000612250 334 ntBASIC6.04□□□□□ -1.44
RFC4P35249 AP005019.3-201ENST00000620418 560 ntBASIC6.04□□□□□ -1.44
RFC4P35249 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.04□□□□□ -1.44
RFC4P35249 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.04□□□□□ -1.44
RFC4P35249 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
RFC4P35249 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFC4P35249 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFC4P35249 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 SNORA37-201ENST00000384504 129 ntBASIC6.03□□□□□ -1.44
RFC4P35249 U3.32-201ENST00000408116 212 ntBASIC6.03□□□□□ -1.44
RFC4P35249 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.03□□□□□ -1.44
RFC4P35249 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC4P35249 MTND2P40-201ENST00000436718 841 ntBASIC6.03□□□□□ -1.44
RFC4P35249 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC4P35249 AC073052.1-201ENST00000440417 714 ntBASIC6.03□□□□□ -1.44
RFC4P35249 GAPDHP14-201ENST00000450472 937 ntBASIC6.03□□□□□ -1.44
RFC4P35249 RPL7P32-201ENST00000457119 744 ntBASIC6.03□□□□□ -1.44
RFC4P35249 CDV3-208ENST00000511392 554 ntTSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 AC015795.1-201ENST00000513669 327 ntBASIC6.03□□□□□ -1.44
RFC4P35249 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.03□□□□□ -1.44
RFC4P35249 VN1R85P-201ENST00000601587 426 ntBASIC6.03□□□□□ -1.44
RFC4P35249 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFC4P35249 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RFC4P35249 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms