Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA9P31269 AL357515.1-201ENST00000402967 542 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 U3.32-201ENST00000408116 212 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 RN7SKP106-201ENST00000410832 272 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 COX5BP7-201ENST00000414780 274 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXA9P31269 SCAND3P1-201ENST00000439854 1060 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 PRPF38AP1-201ENST00000451976 933 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AC092905.1-201ENST00000467527 949 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.09□□□□□ -1.59
HOXA9P31269 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXA9P31269 OR5M2P-201ENST00000529003 936 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AC116553.2-201ENST00000564203 463 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.09□□□□□ -1.59
HOXA9P31269 RN7SL802P-201ENST00000577858 299 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AL121932.1-201ENST00000605542 214 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HOXA9P31269 AC138965.3-201ENST00000623875 498 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.09□□□□□ -1.59
HOXA9P31269 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA9P31269 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA9P31269 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA9P31269 GVINP1-202ENST00000531871 7271 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HOXA9P31269 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
HOXA9P31269 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
HOXA9P31269 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXA9P31269 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 AC068538.1-201ENST00000376856 336 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
HOXA9P31269 RNA5SP397-201ENST00000391323 118 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXA9P31269 LINC00993-201ENST00000420453 540 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 AL034379.1-201ENST00000423216 253 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXA9P31269 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 TCEA1P3-201ENST00000443005 880 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXA9P31269 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 RN7SL517P-201ENST00000462240 305 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 AC021660.1-201ENST00000465006 554 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 AL672167.3-201ENST00000465951 960 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.08□□□□□ -1.6
HOXA9P31269 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXA9P31269 RNU1-6P-201ENST00000516290 144 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.08□□□□□ -1.6
HOXA9P31269 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 MIR4715-201ENST00000584117 79 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.08□□□□□ -1.6
HOXA9P31269 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
HOXA9P31269 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
HOXA9P31269 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HOXA9P31269 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 RBPJP2-201ENST00000618187 1444 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 AC022893.2-201ENST00000564832 3296 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HOXA9P31269 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 AC027228.2-201ENST00000567141 2154 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HOXA9P31269 MIR137-201ENST00000385223 102 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HOXA9P31269 ELOCP19-201ENST00000411919 318 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 PCNPP4-201ENST00000414817 517 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 FABP7P1-201ENST00000424004 391 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 RPL23AP1-201ENST00000428990 471 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 VDAC1P6-201ENST00000430062 855 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.07□□□□□ -1.6
HOXA9P31269 AL162591.2-201ENST00000449634 317 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 CEACAMP6-201ENST00000452007 574 ntBASIC5.07□□□□□ -1.6
HOXA9P31269 ZFRP1-201ENST00000457579 2970 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms