Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC020656.2-201ENST00000613291 5309 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 MIR670-201ENST00000390142 98 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 RRM2P4-201ENST00000441721 562 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC090515.3-201ENST00000560431 315 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 HNRNPCP4-201ENST00000571636 900 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AP005901.4-201ENST00000577336 569 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AC039056.2-201ENST00000622261 511 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
COL4A5P29400 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A5P29400 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A5P29400 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
COL4A5P29400 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A5P29400 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A5P29400 CPHL1P-201ENST00000461341 3407 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A5P29400 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A5P29400 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
COL4A5P29400 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 AC068733.2-201ENST00000605434 1418 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 SCARNA15-201ENST00000607520 4325 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 SNRPFP1-201ENST00000414761 252 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 COX5BP7-201ENST00000414780 274 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 OR13Z1P-201ENST00000416141 834 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 NFYAP1-201ENST00000431953 972 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 AC011998.1-201ENST00000433403 117 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 RPS7P7-201ENST00000463499 571 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 AC023632.4-201ENST00000517783 191 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.49□□□□□ -1.53
COL4A5P29400 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.49□□□□□ -1.53
COL4A5P29400 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 AC005261.2-201ENST00000593427 4258 ntBASIC5.49□□□□□ -1.53
COL4A5P29400 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
COL4A5P29400 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 AL158163.1-201ENST00000603915 1649 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 AL391684.1-202ENST00000641293 1636 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL4A5P29400 RNA5SP453-201ENST00000362503 119 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 SNORA71.3-201ENST00000362582 128 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL4A5P29400 AL049830.4-201ENST00000555149 351 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A5P29400 AC113403.1-201ENST00000604910 193 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.48□□□□□ -1.53
COL4A5P29400 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.48□□□□□ -1.53
COL4A5P29400 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 TRIM51GP-201ENST00000534741 1350 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
COL4A5P29400 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 AC107068.1-201ENST00000563286 4218 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL4A5P29400 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.48□□□□□ -1.53
COL4A5P29400 AL450345.1-202ENST00000605741 3881 ntBASIC5.48□□□□□ -1.53
COL4A5P29400 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
COL4A5P29400 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 MIR331-201ENST00000362302 94 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 AP000580.1-201ENST00000404439 358 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 AC090058.1-201ENST00000498788 435 ntBASIC5.47□□□□□ -1.53
COL4A5P29400 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.47□□□□□ -1.53
COL4A5P29400 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A5P29400 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A5P29400 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
COL4A5P29400 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.47□□□□□ -1.53
COL4A5P29400 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.47□□□□□ -1.53
COL4A5P29400 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL4A5P29400 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms