Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AL390726.5-202ENST00000564800 256 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 AC090751.1-201ENST00000566966 267 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 AC090312.2-201ENST00000582687 378 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 MIR4660-201ENST00000583549 74 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 NF1P5-201ENST00000588287 448 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.34□□□□□ -1.55
CAPN3P20807 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.34□□□□□ -1.55
CAPN3P20807 AC090607.5-201ENST00000615692 224 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 AC018926.1-201ENST00000616335 435 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.34□□□□□ -1.55
CAPN3P20807 AP000943.4-201ENST00000622912 357 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 AC138907.10-201ENST00000623708 983 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 MIR193BHG-214ENST00000641765 509 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 SAMMSON-227ENST00000642114 1199 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CAPN3P20807 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
CAPN3P20807 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.34□□□□□ -1.55
CAPN3P20807 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CAPN3P20807 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.34□□□□□ -1.55
CAPN3P20807 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
CAPN3P20807 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CAPN3P20807 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.34□□□□□ -1.56
CAPN3P20807 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CAPN3P20807 AC104118.1-201ENST00000607625 1589 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 PDZK1P1-202ENST00000425209 1350 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 AC011155.1-201ENST00000316512 456 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 RPL23AP59-201ENST00000399415 461 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 PPIAP9-201ENST00000403866 498 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 HMGB3P18-201ENST00000406327 590 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 EIF4A1P3-201ENST00000411521 244 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.33□□□□□ -1.56
CAPN3P20807 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 UBE2V1P6-201ENST00000430840 422 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 ACTR3P2-201ENST00000439585 1257 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.33□□□□□ -1.56
CAPN3P20807 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 RPL7P45-201ENST00000455851 743 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 RPL23AP71-201ENST00000470966 469 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 CYCSP20-201ENST00000473154 315 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 OR5M14P-201ENST00000506803 618 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 RNU6-334P-201ENST00000517072 102 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 HMGB1P1-201ENST00000522557 636 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 PCNAP4-201ENST00000532690 730 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.33□□□□□ -1.56
CAPN3P20807 FO393422.1-201ENST00000603908 708 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 AC104695.2-201ENST00000605056 775 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 BNIP3P19-201ENST00000605397 577 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 AC073569.3-201ENST00000619055 682 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.33□□□□□ -1.56
CAPN3P20807 AC016717.3-201ENST00000624730 554 ntBASIC5.33□□□□□ -1.56
CAPN3P20807 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CAPN3P20807 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.33□□□□□ -1.56
CAPN3P20807 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CAPN3P20807 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CAPN3P20807 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.33□□□□□ -1.56
CAPN3P20807 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CAPN3P20807 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CAPN3P20807 AL022311.1-201ENST00000623726 19416 ntBASIC5.32□□□□□ -1.56
CAPN3P20807 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 AC017007.4-201ENST00000503353 1352 ntBASIC5.32□□□□□ -1.56
CAPN3P20807 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
CAPN3P20807 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.32□□□□□ -1.56
CAPN3P20807 AL603750.1-201ENST00000624216 1717 ntBASIC5.32□□□□□ -1.56
CAPN3P20807 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 AL078621.3-201ENST00000623707 2042 ntBASIC5.32□□□□□ -1.56
CAPN3P20807 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.32□□□□□ -1.56
CAPN3P20807 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CAPN3P20807 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms