Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGA1P17096 RNU4-25P-201ENST00000410569 230 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGA1P17096 EIF2S2P3-201ENST00000428356 999 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.82□□□□□ -1.64
HMGA1P17096 RHEBP2-201ENST00000450289 600 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.82□□□□□ -1.64
HMGA1P17096 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.82□□□□□ -1.64
HMGA1P17096 AP000827.1-201ENST00000527814 258 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 AC008833.1-201ENST00000611633 691 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
HMGA1P17096 CCT8P1-201ENST00000413611 1657 ntBASIC4.82□□□□□ -1.64
HMGA1P17096 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HMGA1P17096 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 AC017079.1-201ENST00000333650 415 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HMGA1P17096 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
HMGA1P17096 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
HMGA1P17096 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 OR5M12P-201ENST00000423388 929 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGA1P17096 NDUFA5P1-201ENST00000433858 341 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 PRELID3BP5-201ENST00000508612 460 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 RNA5SP249-201ENST00000516127 99 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 AP002981.1-201ENST00000517692 975 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 AC020937.1-201ENST00000519677 1013 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGA1P17096 AC136624.4-201ENST00000573044 370 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.81□□□□□ -1.64
HMGA1P17096 AP005019.3-201ENST00000620418 560 ntBASIC4.81□□□□□ -1.64
HMGA1P17096 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGA1P17096 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGA1P17096 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGA1P17096 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AP000432.2-201ENST00000624164 2048 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
HMGA1P17096 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGA1P17096 AC026951.1-201ENST00000559530 2459 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 SNORA70.2-201ENST00000364506 135 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 SDHCP2-201ENST00000398565 501 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 NPM1P37-201ENST00000403105 874 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AL358178.1-201ENST00000407698 397 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 GAPDHP49-201ENST00000421421 961 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AL356387.2-201ENST00000422272 243 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AP001324.1-201ENST00000428553 399 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 FTH1P16-201ENST00000435241 552 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGA1P17096 GSTA7P-201ENST00000438425 448 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 ISCUP1-201ENST00000454451 448 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AC011276.1-201ENST00000469688 323 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 RPL21P126-201ENST00000470049 478 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 AC098799.3-201ENST00000506095 438 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGA1P17096 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGA1P17096 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGA1P17096 AL590392.1-201ENST00000604960 446 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 AC005962.2-201ENST00000611427 652 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGA1P17096 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 DHX9P1-201ENST00000436565 3076 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.8□□□□□ -1.64
HMGA1P17096 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGA1P17096 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGA1P17096 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
HMGA1P17096 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms