Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 NPM1P33-201ENST00000438918 872 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC073850.1-201ENST00000449243 255 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.05□□□□□ -1.6
CD48P09326 RPSAP50-201ENST00000481955 852 ntBASIC5.05□□□□□ -1.6
CD48P09326 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.05□□□□□ -1.6
CD48P09326 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.05□□□□□ -1.6
CD48P09326 OR10D4P-201ENST00000525892 951 ntBASIC5.05□□□□□ -1.6
CD48P09326 MORF4L1P3-201ENST00000525966 950 ntBASIC5.05□□□□□ -1.6
CD48P09326 OR10G5P-201ENST00000532733 358 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CD48P09326 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CD48P09326 AC012414.2-201ENST00000559474 187 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC087477.6-201ENST00000559595 843 ntBASIC5.05□□□□□ -1.6
CD48P09326 LINC00557-201ENST00000563184 1279 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.05□□□□□ -1.6
CD48P09326 NPM1P45-201ENST00000583151 559 ntBASIC5.05□□□□□ -1.6
CD48P09326 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.05□□□□□ -1.6
CD48P09326 AC096586.2-201ENST00000610260 441 ntBASIC5.05□□□□□ -1.6
CD48P09326 AL121612.2-201ENST00000612261 482 ntBASIC5.05□□□□□ -1.6
CD48P09326 AP001002.2-201ENST00000625137 386 ntBASIC5.05□□□□□ -1.6
CD48P09326 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 AP001273.1-201ENST00000624493 3152 ntBASIC5.05□□□□□ -1.6
CD48P09326 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CD48P09326 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CD48P09326 AL031595.2-201ENST00000624215 19071 ntBASIC5.04□□□□□ -1.6
CD48P09326 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD48P09326 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 RNU6-1176P-201ENST00000390955 107 ntBASIC5.04□□□□□ -1.6
CD48P09326 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD48P09326 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 AL445528.1-201ENST00000426330 420 ntBASIC5.04□□□□□ -1.6
CD48P09326 RPS26P4-201ENST00000431743 355 ntBASIC5.04□□□□□ -1.6
CD48P09326 AL590762.3-201ENST00000436372 640 ntBASIC5.04□□□□□ -1.6
CD48P09326 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 snoU13.20-201ENST00000459180 104 ntBASIC5.04□□□□□ -1.6
CD48P09326 AC116562.1-201ENST00000485355 781 ntBASIC5.04□□□□□ -1.6
CD48P09326 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.04□□□□□ -1.6
CD48P09326 AC140172.1-201ENST00000502928 141 ntBASIC5.04□□□□□ -1.6
CD48P09326 RN7SKP5-201ENST00000517045 272 ntBASIC5.04□□□□□ -1.6
CD48P09326 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
CD48P09326 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 GCSHP4-201ENST00000538792 439 ntBASIC5.04□□□□□ -1.6
CD48P09326 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.04□□□□□ -1.6
CD48P09326 AC093249.4-201ENST00000564755 259 ntBASIC5.04□□□□□ -1.6
CD48P09326 MTND2P13-201ENST00000577438 1039 ntBASIC5.04□□□□□ -1.6
CD48P09326 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 AC098483.2-201ENST00000603158 454 ntBASIC5.04□□□□□ -1.6
CD48P09326 AC087783.2-201ENST00000605070 562 ntBASIC5.04□□□□□ -1.6
CD48P09326 AC010424.2-201ENST00000607594 443 ntBASIC5.04□□□□□ -1.6
CD48P09326 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.04□□□□□ -1.6
CD48P09326 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 AC126323.6-202ENST00000568092 3511 ntBASIC5.04□□□□□ -1.6
CD48P09326 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
CD48P09326 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CD48P09326 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CD48P09326 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.04□□□□□ -1.6
CD48P09326 AL512283.1-201ENST00000606756 1384 ntBASIC5.04□□□□□ -1.6
CD48P09326 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.03□□□□□ -1.6
CD48P09326 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CD48P09326 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CD48P09326 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
CD48P09326 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms