Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC009237.10-201ENST00000414112 510 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC009237.5-201ENST00000414271 501 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC013429.2-201ENST00000418798 781 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.54□□□□□ -1.52
COL2A1P02458 EEF1A1P1-201ENST00000447052 739 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 USP9YP2-201ENST00000504503 1000 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 USP9YP1-201ENST00000513521 1002 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC015795.1-201ENST00000513669 327 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC005868.1-201ENST00000536421 331 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.54□□□□□ -1.52
COL2A1P02458 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.54□□□□□ -1.52
COL2A1P02458 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.54□□□□□ -1.52
COL2A1P02458 AC106785.1-201ENST00000565935 262 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC034105.4-201ENST00000568304 277 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.54□□□□□ -1.52
COL2A1P02458 MIR4429-201ENST00000580105 73 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
COL2A1P02458 AC012409.3-201ENST00000611343 981 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 AC024941.1-201ENST00000612250 334 ntBASIC5.54□□□□□ -1.52
COL2A1P02458 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.54□□□□□ -1.52
COL2A1P02458 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.54□□□□□ -1.52
COL2A1P02458 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
COL2A1P02458 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL2A1P02458 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL2A1P02458 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL2A1P02458 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 NRBF2P2-201ENST00000413087 861 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL2A1P02458 AL732292.1-201ENST00000426692 226 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC006946.1-201ENST00000429106 328 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.53□□□□□ -1.52
COL2A1P02458 NPM1P33-201ENST00000438918 872 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC090142.1-201ENST00000465776 462 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.53□□□□□ -1.52
COL2A1P02458 AC020593.1-201ENST00000507399 299 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC093815.1-201ENST00000508637 280 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 RNA5SP464-201ENST00000516251 108 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.53□□□□□ -1.52
COL2A1P02458 AP000619.2-201ENST00000546014 969 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 NPM1P5-201ENST00000557228 838 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.53□□□□□ -1.52
COL2A1P02458 AC084783.1-201ENST00000565846 910 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC069061.3-201ENST00000582254 823 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC069366.1-201ENST00000583159 838 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.53□□□□□ -1.52
COL2A1P02458 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.53□□□□□ -1.52
COL2A1P02458 AC245389.1-201ENST00000605141 529 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC073137.1-201ENST00000605636 634 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.53□□□□□ -1.52
COL2A1P02458 AC034229.5-201ENST00000624258 185 ntBASIC5.53□□□□□ -1.52
COL2A1P02458 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL2A1P02458 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.53□□□□□ -1.52
COL2A1P02458 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL2A1P02458 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.52□□□□□ -1.53
COL2A1P02458 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 RAD17P1-201ENST00000418130 2042 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.52□□□□□ -1.53
COL2A1P02458 AL359837.1-201ENST00000381357 287 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 RPL32P23-201ENST00000397237 405 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.52□□□□□ -1.53
COL2A1P02458 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.52□□□□□ -1.53
COL2A1P02458 BTG3P1-201ENST00000435859 716 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 AC108751.3-201ENST00000461814 1020 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.52□□□□□ -1.53
COL2A1P02458 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.52□□□□□ -1.53
COL2A1P02458 AL049536.1-201ENST00000625043 744 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 OR51H2P-202ENST00000641424 3046 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
COL2A1P02458 MTCO1P15-201ENST00000529569 1526 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
COL2A1P02458 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 AC005831.1-201ENST00000624384 1697 ntBASIC5.52□□□□□ -1.53
COL2A1P02458 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
COL2A1P02458 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.52□□□□□ -1.53
COL2A1P02458 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL2A1P02458 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.52□□□□□ -1.53
COL2A1P02458 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
COL2A1P02458 SCARNA10-201ENST00000459255 330 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC109327.1-201ENST00000471666 403 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC104763.1-201ENST00000475274 360 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 RPL5P12-201ENST00000477071 851 ntBASIC5.51□□□□□ -1.53
COL2A1P02458 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.51□□□□□ -1.53
COL2A1P02458 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.51□□□□□ -1.53
COL2A1P02458 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.51□□□□□ -1.53
COL2A1P02458 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
COL2A1P02458 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms