Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HOXA2O43364 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 Y_RNA.639-201ENST00000458981 102 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 RN7SL259P-201ENST00000478499 253 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 RN7SL655P-201ENST00000486087 298 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 RNA5SP401-201ENST00000515920 127 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 RNU6-1046P-201ENST00000516538 107 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 Y_RNA.691-201ENST00000516611 103 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 BTF3P12-201ENST00000519620 469 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC7.74□□□□□ -1.17
HOXA2O43364 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.74□□□□□ -1.17
HOXA2O43364 MRPS21P9-201ENST00000571150 257 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC090425.1-201ENST00000610007 140 ntBASIC7.74□□□□□ -1.17
HOXA2O43364 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 SRP54-214ENST00000630962 162 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HOXA2O43364 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HOXA2O43364 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HOXA2O43364 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC7.74□□□□□ -1.17
HOXA2O43364 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.74□□□□□ -1.17
HOXA2O43364 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 BRAFP1-201ENST00000445336 2703 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HOXA2O43364 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 HYDIN2-203ENST00000614586 13885 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HOXA2O43364 Y_RNA.184-201ENST00000363884 108 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RNU6-115P-201ENST00000364310 107 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 Y_RNA.259-201ENST00000364619 101 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 Y_RNA.401-201ENST00000383965 117 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RNU6-43P-201ENST00000384302 107 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RN7SKP58-201ENST00000411010 305 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RN7SKP108-201ENST00000411367 328 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 IFNA20P-201ENST00000436840 528 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AC064862.5-201ENST00000440618 334 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RPS7P5-201ENST00000441482 581 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AL136380.1-201ENST00000447970 162 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RPS27AP17-201ENST00000463344 455 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AC005165.2-201ENST00000466070 380 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RN7SL836P-201ENST00000476140 296 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RN7SL502P-201ENST00000481857 290 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.73□□□□□ -1.17
HOXA2O43364 AC092349.1-201ENST00000504903 310 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AC022296.2-201ENST00000512424 202 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 MINOS1P4-201ENST00000515470 318 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RNA5SP287-201ENST00000516358 103 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 SNORD60.2-201ENST00000516883 86 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 Y_RNA.711-201ENST00000516993 102 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AP003181.2-201ENST00000528941 181 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 AC103808.6-201ENST00000578035 464 ntTSL 3 BASIC7.73□□□□□ -1.17
HOXA2O43364 MIR4312-201ENST00000579909 76 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 RN7SL66P-201ENST00000582099 264 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 XRCC6P4-201ENST00000518193 2067 ntBASIC7.73□□□□□ -1.17
HOXA2O43364 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
HOXA2O43364 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HOXA2O43364 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.73□□□□□ -1.17
HOXA2O43364 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.72□□□□□ -1.17
HOXA2O43364 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HOXA2O43364 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms