Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRTM2O43300 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 OR4K12P-201ENST00000406538 961 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LRRTM2O43300 RN7SKP16-201ENST00000410180 299 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 MTND2P2-201ENST00000434633 945 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 CYCSP24-201ENST00000445119 316 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AC099063.2-201ENST00000446360 662 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 PTMAP3-201ENST00000447474 330 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AL672138.1-201ENST00000450604 1015 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.82□□□□□ -1.64
LRRTM2O43300 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 AC100784.1-201ENST00000522790 310 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 OR8X1P-201ENST00000534542 869 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 BNIP3P1-201ENST00000547295 580 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRTM2O43300 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRTM2O43300 AC011447.4-201ENST00000587562 111 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.82□□□□□ -1.64
LRRTM2O43300 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.82□□□□□ -1.64
LRRTM2O43300 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 UGT2B26P-201ENST00000508672 1613 ntBASIC4.82□□□□□ -1.64
LRRTM2O43300 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.82□□□□□ -1.64
LRRTM2O43300 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LRRTM2O43300 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LRRTM2O43300 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC083799.1-201ENST00000366451 910 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC013442.1-201ENST00000397347 228 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 RNA5SP487-201ENST00000410186 122 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 RN7SKP247-201ENST00000411094 308 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 NPM1P40-201ENST00000412758 733 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 CASP3P1-201ENST00000446037 609 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC022336.1-201ENST00000475510 337 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRTM2O43300 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC024940.3-201ENST00000538551 316 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRTM2O43300 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC005341.1-201ENST00000571086 708 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC245128.3-201ENST00000594721 748 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 AC100814.1-201ENST00000606963 623 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AC244107.2-201ENST00000611773 76 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AP000346.3-201ENST00000622821 210 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 AC091905.4-201ENST00000623432 202 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.81□□□□□ -1.64
LRRTM2O43300 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.81□□□□□ -1.64
LRRTM2O43300 INTS6P1-201ENST00000504674 2530 ntBASIC4.81□□□□□ -1.64
LRRTM2O43300 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LRRTM2O43300 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LRRTM2O43300 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms