Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX1O00570 AC079841.1-201ENST00000481228 950 ntBASIC6.82□□□□□ -1.32
SOX1O00570 VPS26AP1-201ENST00000483197 979 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC6.82□□□□□ -1.32
SOX1O00570 RPL7P24-201ENST00000493052 752 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC131392.1-201ENST00000506490 633 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 AC083923.1-201ENST00000523708 376 ntBASIC6.82□□□□□ -1.32
SOX1O00570 OR4C2P-201ENST00000530855 1064 ntBASIC6.82□□□□□ -1.32
SOX1O00570 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 AP002453.2-201ENST00000533503 320 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AL591767.3-201ENST00000554632 525 ntBASIC6.82□□□□□ -1.32
SOX1O00570 PCMTD1P2-201ENST00000565017 355 ntBASIC6.82□□□□□ -1.32
SOX1O00570 MIR4505-201ENST00000582238 73 ntBASIC6.82□□□□□ -1.32
SOX1O00570 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.82□□□□□ -1.32
SOX1O00570 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.82□□□□□ -1.32
SOX1O00570 RPSAP73-201ENST00000614820 330 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SOX1O00570 AC009166.2-201ENST00000624410 2833 ntBASIC6.82□□□□□ -1.32
SOX1O00570 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.82□□□□□ -1.32
SOX1O00570 PABPC1P6-201ENST00000445594 1829 ntBASIC6.82□□□□□ -1.32
SOX1O00570 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 PABPC1P9-201ENST00000426076 1612 ntBASIC6.82□□□□□ -1.32
SOX1O00570 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC6.82□□□□□ -1.32
SOX1O00570 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.82□□□□□ -1.32
SOX1O00570 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SOX1O00570 AC011008.2-201ENST00000624866 3352 ntBASIC6.82□□□□□ -1.32
SOX1O00570 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 Z97989.1-201ENST00000531702 2421 ntBASIC6.81□□□□□ -1.32
SOX1O00570 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 AC008753.1-201ENST00000423096 284 ntBASIC6.81□□□□□ -1.32
SOX1O00570 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 FTH1P20-201ENST00000434913 548 ntBASIC6.81□□□□□ -1.32
SOX1O00570 RPS25P9-201ENST00000435591 252 ntBASIC6.81□□□□□ -1.32
SOX1O00570 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.81□□□□□ -1.32
SOX1O00570 SPRYD7P1-201ENST00000443861 570 ntBASIC6.81□□□□□ -1.32
SOX1O00570 Z99127.3-201ENST00000448158 395 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC234771.3-201ENST00000454984 622 ntBASIC6.81□□□□□ -1.32
SOX1O00570 RANP1-206ENST00000455094 651 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 AC135721.2-201ENST00000464237 300 ntBASIC6.81□□□□□ -1.32
SOX1O00570 CEACAMP10-202ENST00000495431 496 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC108941.1-201ENST00000502853 530 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC093824.1-201ENST00000508796 343 ntBASIC6.81□□□□□ -1.32
SOX1O00570 CYP4F27P-201ENST00000514557 494 ntBASIC6.81□□□□□ -1.32
SOX1O00570 BX510359.5-201ENST00000515651 304 ntBASIC6.81□□□□□ -1.32
SOX1O00570 RNU6-1225P-201ENST00000516336 65 ntBASIC6.81□□□□□ -1.32
SOX1O00570 RNU6-1308P-201ENST00000516817 103 ntBASIC6.81□□□□□ -1.32
SOX1O00570 IGHV4-55-201ENST00000520889 368 ntBASIC6.81□□□□□ -1.32
SOX1O00570 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.81□□□□□ -1.32
SOX1O00570 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 SEPT7P9-203ENST00000604116 343 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC002553.4-201ENST00000616896 331 ntBASIC6.81□□□□□ -1.32
SOX1O00570 AC112204.3-201ENST00000623822 332 ntBASIC6.81□□□□□ -1.32
SOX1O00570 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.81□□□□□ -1.32
SOX1O00570 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 AL161901.1-201ENST00000624954 3425 ntBASIC6.81□□□□□ -1.32
SOX1O00570 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.81□□□□□ -1.32
SOX1O00570 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 MTCO1P6-201ENST00000481192 1384 ntBASIC6.81□□□□□ -1.32
SOX1O00570 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
SOX1O00570 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SOX1O00570 AC096992.2-201ENST00000609553 1684 ntBASIC6.81□□□□□ -1.32
SOX1O00570 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.8□□□□□ -1.32
SOX1O00570 TRIM51HP-202ENST00000530412 1823 ntBASIC6.8□□□□□ -1.32
SOX1O00570 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms