Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 OR7A19P-201ENST00000608051 733 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AC004232.3-201ENST00000622977 525 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 AL034370.1-201ENST00000397254 1590 ntBASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMIM28A0A1B0GU29 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 SAMMSON-210ENST00000641260 1308 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AL050305.1-201ENST00000399993 1230 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC016397.1-201ENST00000412463 242 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 RPL7P57-201ENST00000423238 740 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 EIF4HP2-201ENST00000424380 563 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 MRPS21P2-201ENST00000424704 264 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 CENPIP1-201ENST00000425713 902 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC004938.1-201ENST00000438468 308 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 ARL2BPP10-201ENST00000446487 531 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC090142.1-201ENST00000465776 462 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC090686.1-201ENST00000481577 749 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 DEFB109A-201ENST00000482450 265 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 MTND4LP2-201ENST00000502312 285 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 RNA5SP249-201ENST00000516127 99 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC018552.1-201ENST00000562099 811 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC020915.5-201ENST00000596836 964 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 AC093765.1-201ENST00000603758 881 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 KARSP3-201ENST00000571212 1504 ntBASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.05□□□□□ -1.6
SMIM28A0A1B0GU29 OR9K1P-202ENST00000641111 3217 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 ZNF137P-201ENST00000456718 1920 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 RPS27AP7-201ENST00000422792 455 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 CYCSP42-201ENST00000450823 238 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC090602.1-201ENST00000469695 252 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 RN7SL481P-201ENST00000477764 299 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 CEACAMP10-202ENST00000495431 496 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MTCO3P42-201ENST00000509488 518 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MTCO3P39-201ENST00000514812 518 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MIR5096-201ENST00000583713 70 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MIR4715-201ENST00000584117 79 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 ELOCP28-201ENST00000590044 317 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AF230666.2-201ENST00000602328 725 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC011815.3-201ENST00000624194 473 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 U3.53-201ENST00000628922 216 ntBASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMIM28A0A1B0GU29 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMIM28A0A1B0GU29 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
SMIM28A0A1B0GU29 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.03□□□□□ -1.6
SMIM28A0A1B0GU29 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMIM28A0A1B0GU29 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SMIM28A0A1B0GU29 AC093671.1-201ENST00000624981 2929 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms