Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLIC4Q9Y696 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.25■■□□□ 1.15
CLIC4Q9Y696 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 SOX15-203ENST00000570788 1093 ntBASIC22.25■■□□□ 1.15
CLIC4Q9Y696 AC133041.1-202ENST00000642053 222 ntBASIC22.25■■□□□ 1.15
CLIC4Q9Y696 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 LINC01465-201ENST00000408887 1940 ntBASIC22.25■■□□□ 1.15
CLIC4Q9Y696 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLIC4Q9Y696 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 TEX21P-204ENST00000641479 1693 ntBASIC22.24■■□□□ 1.15
CLIC4Q9Y696 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 ZNF815P-204ENST00000434898 1737 ntBASIC22.24■■□□□ 1.15
CLIC4Q9Y696 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLIC4Q9Y696 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC22.23■■□□□ 1.15
CLIC4Q9Y696 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 AP006587.1-201ENST00000534129 1502 ntBASIC22.22■■□□□ 1.15
CLIC4Q9Y696 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 AL049812.1-201ENST00000432563 2267 ntBASIC22.22■■□□□ 1.15
CLIC4Q9Y696 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.22■■□□□ 1.15
CLIC4Q9Y696 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 AL121906.2-201ENST00000621597 723 ntBASIC22.22■■□□□ 1.15
CLIC4Q9Y696 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLIC4Q9Y696 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms