Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 AC133681.1-201ENST00000465482 601 ntBASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 AC004264.1-201ENST00000608354 794 ntBASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDHB13Q9Y5F0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 KRASP1-201ENST00000407852 552 ntBASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.52■■□□□ 1.04
PCDHB13Q9Y5F0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHB13Q9Y5F0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDHB13Q9Y5F0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.52■■□□□ 1.03
PCDHB13Q9Y5F0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 AC124016.1-201ENST00000609552 612 ntBASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 KRT8P8-201ENST00000434750 1448 ntBASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PCDHB13Q9Y5F0 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 AC110285.5-201ENST00000611501 352 ntBASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB13Q9Y5F0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB13Q9Y5F0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms