Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00588Q9Y4M8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 MESTP1-201ENST00000404287 994 ntBASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AL390955.1-201ENST00000428694 934 ntBASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AC011506.1-201ENST00000474329 610 ntBASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00588Q9Y4M8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 FITM1-202ENST00000559294 800 ntBASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 AC097493.4-201ENST00000641197 219 ntBASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 KRT8P9-201ENST00000558927 1449 ntBASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 TCF3P1-201ENST00000423021 1937 ntBASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00588Q9Y4M8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LINC00588Q9Y4M8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms