Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 LINC00167-201ENST00000530583 1419 ntBASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 UPF3AP3-201ENST00000420996 769 ntBASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 MOK-208ENST00000519058 917 ntTSL 2 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RIMBP3Q9UFD9 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
RIMBP3Q9UFD9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
RIMBP3Q9UFD9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RIMBP3Q9UFD9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC31.22■■■□□ 2.59
RIMBP3Q9UFD9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC31.21■■■□□ 2.59
RIMBP3Q9UFD9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 HTR5BP-201ENST00000430851 1154 ntBASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 AC239800.4-201ENST00000603712 296 ntBASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 AC148477.8-201ENST00000624298 468 ntBASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 AC011484.1-201ENST00000377652 1995 ntBASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
RIMBP3Q9UFD9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 AL035633.1-201ENST00000406139 838 ntBASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 KRT18P67-201ENST00000432816 1264 ntBASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 MIR4674-201ENST00000582457 87 ntBASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 AC099336.1-202ENST00000602961 463 ntBASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.58
RIMBP3Q9UFD9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC31.19■■■□□ 2.58
RIMBP3Q9UFD9 AC018553.1-201ENST00000616682 1458 ntBASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 RPSAP43-201ENST00000402237 625 ntBASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.18■■■□□ 2.58
RIMBP3Q9UFD9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 CALY-203ENST00000368558 825 ntTSL 5 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RIMBP3Q9UFD9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 SART3-203ENST00000546611 1184 ntBASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 GPX1P2-201ENST00000429271 606 ntBASIC31.16■■■□□ 2.58
RIMBP3Q9UFD9 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 H19-201ENST00000411754 1788 ntTSL 5 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 HES2-202ENST00000377836 507 ntTSL 2 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 MIR940-201ENST00000401276 94 ntBASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC31.15■■■□□ 2.58
RIMBP3Q9UFD9 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 AC020928.2-201ENST00000588717 2197 ntBASIC31.14■■■□□ 2.58
RIMBP3Q9UFD9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms