Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 HYMAI.1-201ENST00000620949 238 ntBASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
PHRF1Q9P1Y6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 NEK4P2-201ENST00000580004 1012 ntBASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 NPAP1P7-201ENST00000613027 823 ntBASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PHRF1Q9P1Y6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 STARP1-201ENST00000397973 869 ntBASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 LINC01465-201ENST00000408887 1940 ntBASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PHRF1Q9P1Y6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 FXN-203ENST00000396366 922 ntTSL 2 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC26.17■■□□□ 1.78
PHRF1Q9P1Y6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 AC026396.1-201ENST00000419388 421 ntBASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
PHRF1Q9P1Y6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 ATP5G2P1-201ENST00000433580 426 ntBASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 PRSS44-201ENST00000515154 1146 ntBASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 AL136038.3-201ENST00000561909 1096 ntBASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PHRF1Q9P1Y6 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 AP000523.1-201ENST00000398242 1049 ntBASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
PHRF1Q9P1Y6 FEM1AP1-201ENST00000431297 1995 ntBASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms