Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AC034232.1-201ENST00000506026 1064 ntBASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHD8Q9HCK8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 TOB2P1-201ENST00000469761 992 ntBASIC18.22■□□□□ 0.51
CHD8Q9HCK8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 AP001005.1-201ENST00000571755 1248 ntBASIC18.22■□□□□ 0.51
CHD8Q9HCK8 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHD8Q9HCK8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AC116351.2-201ENST00000606540 1585 ntBASIC18.21■□□□□ 0.51
CHD8Q9HCK8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 SAPCD2P3-201ENST00000455031 850 ntBASIC18.21■□□□□ 0.51
CHD8Q9HCK8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AC112497.1-201ENST00000624824 639 ntBASIC18.21■□□□□ 0.51
CHD8Q9HCK8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.21■□□□□ 0.51
CHD8Q9HCK8 AC027601.4-201ENST00000611259 610 ntBASIC18.21■□□□□ 0.51
CHD8Q9HCK8 TFP1-202ENST00000475455 1573 ntBASIC18.21■□□□□ 0.51
CHD8Q9HCK8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 HLA-F-220ENST00000434407 884 ntBASIC18.2■□□□□ 0.5
CHD8Q9HCK8 AC004967.1-201ENST00000453589 447 ntBASIC18.2■□□□□ 0.5
CHD8Q9HCK8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.2■□□□□ 0.5
CHD8Q9HCK8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHD8Q9HCK8 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.19■□□□□ 0.5
CHD8Q9HCK8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms