Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 AC063952.2-201ENST00000498792 1227 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 HLA-A-209ENST00000638375 975 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 AC073314.1-201ENST00000568729 2216 ntBASIC20.15■□□□□ 0.82
BRD9Q9H8M2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BRD9Q9H8M2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.14■□□□□ 0.82
BRD9Q9H8M2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
BRD9Q9H8M2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BRD9Q9H8M2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
BRD9Q9H8M2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 AC117947.1-201ENST00000427448 529 ntBASIC20.14■□□□□ 0.81
BRD9Q9H8M2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
BRD9Q9H8M2 AC020907.5-201ENST00000624372 1936 ntBASIC20.14■□□□□ 0.81
BRD9Q9H8M2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 AC008040.2-201ENST00000461049 708 ntBASIC20.13■□□□□ 0.81
BRD9Q9H8M2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BRD9Q9H8M2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 FEM1AP1-201ENST00000431297 1995 ntBASIC20.12■□□□□ 0.81
BRD9Q9H8M2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AC139887.4-201ENST00000607877 719 ntBASIC20.12■□□□□ 0.81
BRD9Q9H8M2 AC091076.1-201ENST00000610741 619 ntBASIC20.12■□□□□ 0.81
BRD9Q9H8M2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 SMG8-203ENST00000578922 2178 ntBASIC20.12■□□□□ 0.81
BRD9Q9H8M2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BRD9Q9H8M2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 UPK3BP1-201ENST00000428678 509 ntBASIC20.11■□□□□ 0.81
BRD9Q9H8M2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.11■□□□□ 0.81
BRD9Q9H8M2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms