Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 AC090164.3-201ENST00000610780 2143 ntBASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MAP1LC3AQ9H492 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MAP1LC3AQ9H492 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 PCDHB18P-201ENST00000524813 2368 ntBASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 PTMA-205ENST00000410064 814 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 AL512631.2-201ENST00000604634 923 ntBASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.22□□□□□ -0.13
MAP1LC3AQ9H492 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.21□□□□□ -0.13
MAP1LC3AQ9H492 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 AP001271.2-201ENST00000624018 1556 ntBASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MAP1LC3AQ9H492 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms