Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 AL031284.1-201ENST00000419297 478 ntBASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 SAPCD2P3-201ENST00000455031 850 ntBASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 TFP1-202ENST00000475455 1573 ntBASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
LRFN3Q9BTN0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 UPF3AP3-201ENST00000420996 769 ntBASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 TSPY22P-201ENST00000427496 604 ntBASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
LRFN3Q9BTN0 AC020928.2-201ENST00000588717 2197 ntBASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 MIR2861-201ENST00000636310 90 ntBASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
LRFN3Q9BTN0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 AC116351.2-201ENST00000606540 1585 ntBASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RPL13AP23-201ENST00000480739 586 ntBASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 AF238378.1-201ENST00000526806 358 ntBASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LRFN3Q9BTN0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 FAM197Y8-203ENST00000450145 560 ntBASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 AC083906.6-201ENST00000641366 219 ntBASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 AC079781.4-201ENST00000641908 219 ntBASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
LRFN3Q9BTN0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRFN3Q9BTN0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AC093909.1-201ENST00000504731 1122 ntBASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 REXO1L6P-202ENST00000619970 1078 ntBASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.51■□□□□ 0.71
LRFN3Q9BTN0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms