Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPAS1Q99742 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NPAS1Q99742 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
NPAS1Q99742 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NPAS1Q99742 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.77■□□□□ 0.43
NPAS1Q99742 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NPAS1Q99742 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.76■□□□□ 0.43
NPAS1Q99742 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.76■□□□□ 0.43
NPAS1Q99742 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPAS1Q99742 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.76■□□□□ 0.43
NPAS1Q99742 AC133681.1-201ENST00000465482 601 ntBASIC17.76■□□□□ 0.43
NPAS1Q99742 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
NPAS1Q99742 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.76■□□□□ 0.43
NPAS1Q99742 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.76■□□□□ 0.43
NPAS1Q99742 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
NPAS1Q99742 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
NPAS1Q99742 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NPAS1Q99742 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
NPAS1Q99742 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.75■□□□□ 0.43
NPAS1Q99742 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NPAS1Q99742 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.75■□□□□ 0.43
NPAS1Q99742 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.75■□□□□ 0.43
NPAS1Q99742 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 AC087289.5-201ENST00000586076 3175 ntBASIC17.75■□□□□ 0.43
NPAS1Q99742 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NPAS1Q99742 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
NPAS1Q99742 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPAS1Q99742 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NPAS1Q99742 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NPAS1Q99742 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS1Q99742 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS1Q99742 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS1Q99742 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.74■□□□□ 0.43
NPAS1Q99742 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.74■□□□□ 0.43
NPAS1Q99742 AC110285.5-201ENST00000611501 352 ntBASIC17.74■□□□□ 0.43
NPAS1Q99742 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.74■□□□□ 0.43
NPAS1Q99742 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.74■□□□□ 0.43
NPAS1Q99742 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.74■□□□□ 0.43
NPAS1Q99742 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPAS1Q99742 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms