Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX18Q96RF0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX18Q96RF0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX18Q96RF0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SNX18Q96RF0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SNX18Q96RF0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.72■□□□□ 0.43
SNX18Q96RF0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 AL355472.2-201ENST00000422958 438 ntBASIC17.71■□□□□ 0.43
SNX18Q96RF0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.71■□□□□ 0.43
SNX18Q96RF0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SNX18Q96RF0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNX18Q96RF0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX18Q96RF0 AC079598.2-202ENST00000546624 1451 ntBASIC17.7■□□□□ 0.42
SNX18Q96RF0 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX18Q96RF0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNX18Q96RF0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 AC138932.1-201ENST00000534164 6830 ntBASIC17.7■□□□□ 0.42
SNX18Q96RF0 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX18Q96RF0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 AC133552.2-202ENST00000575694 574 ntBASIC17.7■□□□□ 0.42
SNX18Q96RF0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNX18Q96RF0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNX18Q96RF0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 AC105036.2-201ENST00000569468 176 ntBASIC17.69■□□□□ 0.42
SNX18Q96RF0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SNX18Q96RF0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNX18Q96RF0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX18Q96RF0 GUSBP6-202ENST00000438529 1198 ntBASIC17.68■□□□□ 0.42
SNX18Q96RF0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX18Q96RF0 AF201337.1-201ENST00000520239 748 ntBASIC17.68■□□□□ 0.42
SNX18Q96RF0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms