Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SHDQ96IW2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.76■□□□□ 0.75
SHDQ96IW2 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SHDQ96IW2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.76■□□□□ 0.75
SHDQ96IW2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHDQ96IW2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SHDQ96IW2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 ATP5G2P1-201ENST00000433580 426 ntBASIC19.75■□□□□ 0.75
SHDQ96IW2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.75■□□□□ 0.75
SHDQ96IW2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.75■□□□□ 0.75
SHDQ96IW2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.75■□□□□ 0.75
SHDQ96IW2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHDQ96IW2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
SHDQ96IW2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.74■□□□□ 0.75
SHDQ96IW2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.74■□□□□ 0.75
SHDQ96IW2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 STARP1-201ENST00000397973 869 ntBASIC19.74■□□□□ 0.75
SHDQ96IW2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.74■□□□□ 0.75
SHDQ96IW2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.74■□□□□ 0.75
SHDQ96IW2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.74■□□□□ 0.75
SHDQ96IW2 AC092720.2-201ENST00000602388 1665 ntBASIC19.74■□□□□ 0.75
SHDQ96IW2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHDQ96IW2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.73■□□□□ 0.75
SHDQ96IW2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.73■□□□□ 0.75
SHDQ96IW2 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.73■□□□□ 0.75
SHDQ96IW2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 KRT8P45-201ENST00000414328 1447 ntBASIC19.73■□□□□ 0.75
SHDQ96IW2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHDQ96IW2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
SHDQ96IW2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.72■□□□□ 0.75
SHDQ96IW2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.72■□□□□ 0.75
SHDQ96IW2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.72■□□□□ 0.75
SHDQ96IW2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.72■□□□□ 0.75
SHDQ96IW2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.72■□□□□ 0.75
SHDQ96IW2 LINC01311-201ENST00000565162 1445 ntBASIC19.72■□□□□ 0.75
SHDQ96IW2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.72■□□□□ 0.75
SHDQ96IW2 FBXW4P1-201ENST00000426721 2239 ntBASIC19.72■□□□□ 0.75
SHDQ96IW2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHDQ96IW2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.71■□□□□ 0.75
SHDQ96IW2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.71■□□□□ 0.75
SHDQ96IW2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.71■□□□□ 0.75
SHDQ96IW2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.71■□□□□ 0.75
SHDQ96IW2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.71■□□□□ 0.75
SHDQ96IW2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.71■□□□□ 0.75
SHDQ96IW2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.71■□□□□ 0.75
SHDQ96IW2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.71■□□□□ 0.75
SHDQ96IW2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHDQ96IW2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms