Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.57■□□□□ 0.72
SIPA1Q96FS4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.57■□□□□ 0.72
SIPA1Q96FS4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SIPA1Q96FS4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SIPA1Q96FS4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.56■□□□□ 0.72
SIPA1Q96FS4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.56■□□□□ 0.72
SIPA1Q96FS4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 AIRN-201ENST00000601203 4374 ntBASIC19.56■□□□□ 0.72
SIPA1Q96FS4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SIPA1Q96FS4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.55■□□□□ 0.72
SIPA1Q96FS4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 INGX-201ENST00000359239 846 ntBASIC19.55■□□□□ 0.72
SIPA1Q96FS4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 AC091390.4-202ENST00000476426 537 ntBASIC19.55■□□□□ 0.72
SIPA1Q96FS4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 RNF165-205ENST00000588679 2904 ntBASIC19.55■□□□□ 0.72
SIPA1Q96FS4 AC096733.2-201ENST00000609937 1394 ntBASIC19.55■□□□□ 0.72
SIPA1Q96FS4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.72
SIPA1Q96FS4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 FAM87A-204ENST00000613235 858 ntBASIC19.54■□□□□ 0.72
SIPA1Q96FS4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 AC116562.4-202ENST00000641738 218 ntBASIC19.54■□□□□ 0.72
SIPA1Q96FS4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.54■□□□□ 0.72
SIPA1Q96FS4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 CCR12P-201ENST00000446203 998 ntBASIC19.53■□□□□ 0.72
SIPA1Q96FS4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 Z85996.1-201ENST00000494644 937 ntBASIC19.53■□□□□ 0.72
SIPA1Q96FS4 AL160286.2-201ENST00000567150 934 ntBASIC19.53■□□□□ 0.72
SIPA1Q96FS4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 AC007375.3-201ENST00000600936 2314 ntBASIC19.53■□□□□ 0.72
SIPA1Q96FS4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SIPA1Q96FS4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.52■□□□□ 0.72
SIPA1Q96FS4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SIPA1Q96FS4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SIPA1Q96FS4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SIPA1Q96FS4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms