Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GCN1Q92616 YBX2P1-201ENST00000394192 760 ntBASIC17.15■□□□□ 0.34
GCN1Q92616 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GCN1Q92616 AP006288.1-201ENST00000446065 395 ntBASIC17.15■□□□□ 0.34
GCN1Q92616 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCN1Q92616 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.15■□□□□ 0.34
GCN1Q92616 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GCN1Q92616 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
GCN1Q92616 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCN1Q92616 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.15■□□□□ 0.34
GCN1Q92616 MED15P5-201ENST00000423150 992 ntBASIC17.15■□□□□ 0.34
GCN1Q92616 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.15■□□□□ 0.34
GCN1Q92616 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.15■□□□□ 0.34
GCN1Q92616 AC093909.1-201ENST00000504731 1122 ntBASIC17.15■□□□□ 0.34
GCN1Q92616 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GCN1Q92616 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.15■□□□□ 0.34
GCN1Q92616 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.15■□□□□ 0.34
GCN1Q92616 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.15■□□□□ 0.34
GCN1Q92616 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GCN1Q92616 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.14■□□□□ 0.34
GCN1Q92616 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.14■□□□□ 0.34
GCN1Q92616 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GCN1Q92616 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
GCN1Q92616 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.14■□□□□ 0.33
GCN1Q92616 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.14■□□□□ 0.33
GCN1Q92616 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.14■□□□□ 0.33
GCN1Q92616 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.14■□□□□ 0.33
GCN1Q92616 AC112482.1-201ENST00000492080 688 ntBASIC17.14■□□□□ 0.33
GCN1Q92616 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.14■□□□□ 0.33
GCN1Q92616 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 AL596442.2-201ENST00000610240 980 ntBASIC17.14■□□□□ 0.33
GCN1Q92616 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.14■□□□□ 0.33
GCN1Q92616 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.14■□□□□ 0.33
GCN1Q92616 AC245100.3-201ENST00000441281 285 ntBASIC17.14■□□□□ 0.33
GCN1Q92616 AL591424.1-201ENST00000442569 1213 ntBASIC17.14■□□□□ 0.33
GCN1Q92616 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.14■□□□□ 0.33
GCN1Q92616 AL136038.4-201ENST00000603606 1261 ntBASIC17.14■□□□□ 0.33
GCN1Q92616 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GCN1Q92616 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 ECEL1P1-201ENST00000373592 1742 ntBASIC17.13■□□□□ 0.33
GCN1Q92616 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.13■□□□□ 0.33
GCN1Q92616 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.13■□□□□ 0.33
GCN1Q92616 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.13■□□□□ 0.33
GCN1Q92616 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.13■□□□□ 0.33
GCN1Q92616 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.13■□□□□ 0.33
GCN1Q92616 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.13■□□□□ 0.33
GCN1Q92616 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 AC106028.4-201ENST00000614509 607 ntBASIC17.13■□□□□ 0.33
GCN1Q92616 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.13■□□□□ 0.33
GCN1Q92616 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GCN1Q92616 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.13■□□□□ 0.33
GCN1Q92616 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.12■□□□□ 0.33
GCN1Q92616 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GCN1Q92616 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GCN1Q92616 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
GCN1Q92616 MIR770-201ENST00000390219 98 ntBASIC17.12■□□□□ 0.33
GCN1Q92616 SEC1P-202ENST00000473944 940 ntBASIC17.12■□□□□ 0.33
GCN1Q92616 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.12■□□□□ 0.33
GCN1Q92616 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GCN1Q92616 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
GCN1Q92616 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.12■□□□□ 0.33
GCN1Q92616 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.12■□□□□ 0.33
GCN1Q92616 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.12■□□□□ 0.33
GCN1Q92616 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GCN1Q92616 AC093323.1-202ENST00000635031 2045 ntBASIC17.11■□□□□ 0.33
GCN1Q92616 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCN1Q92616 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.11■□□□□ 0.33
GCN1Q92616 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.11■□□□□ 0.33
GCN1Q92616 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCN1Q92616 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
GCN1Q92616 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.11■□□□□ 0.33
GCN1Q92616 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GCN1Q92616 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.11■□□□□ 0.33
GCN1Q92616 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCN1Q92616 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GCN1Q92616 SCARNA2-201ENST00000458748 420 ntBASIC17.11■□□□□ 0.33
GCN1Q92616 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
GCN1Q92616 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms