Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RAPGEF4Q8WZA2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 FEM1AP1-201ENST00000431297 1995 ntBASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
RAPGEF4Q8WZA2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 NMU-205ENST00000511469 756 ntTSL 3 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 AL031432.5-201ENST00000641059 760 ntBASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
RAPGEF4Q8WZA2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 CKBP1-201ENST00000565489 1086 ntBASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC25.59■■□□□ 1.69
RAPGEF4Q8WZA2 KRT8P41-201ENST00000533985 1514 ntBASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 DBP-204ENST00000599385 709 ntTSL 3 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 AP000550.4-202ENST00000639755 178 ntBASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
RAPGEF4Q8WZA2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
RAPGEF4Q8WZA2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms