Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 AP000974.1-201ENST00000623909 2387 ntBASIC19.93■□□□□ 0.78
SCG3Q8WXD2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 AC004408.2-201ENST00000623613 2777 ntBASIC19.93■□□□□ 0.78
SCG3Q8WXD2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.93■□□□□ 0.78
SCG3Q8WXD2 LETM1P2-201ENST00000597330 2178 ntBASIC19.93■□□□□ 0.78
SCG3Q8WXD2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 HLA-G-202ENST00000376815 851 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 HLA-G-203ENST00000376818 1127 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 POM121L13P-201ENST00000422362 380 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 C1QBPP2-201ENST00000528754 825 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 AL359736.2-201ENST00000621992 437 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 KRT16P6-202ENST00000425692 1426 ntBASIC19.92■□□□□ 0.78
SCG3Q8WXD2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCG3Q8WXD2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 RPPH1-201ENST00000516869 333 ntBASIC19.91■□□□□ 0.78
SCG3Q8WXD2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 RN7SL471P-201ENST00000580476 299 ntBASIC19.91■□□□□ 0.78
SCG3Q8WXD2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCG3Q8WXD2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 TNXA-203ENST00000507684 2038 ntBASIC19.9■□□□□ 0.78
SCG3Q8WXD2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
SCG3Q8WXD2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG3Q8WXD2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCG3Q8WXD2 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG3Q8WXD2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCG3Q8WXD2 MIR718-201ENST00000390190 70 ntBASIC19.89■□□□□ 0.77
SCG3Q8WXD2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms