Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PTCD2Q8WV60 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTCD2Q8WV60 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 Z82202.1-201ENST00000623446 1880 ntBASIC19.72■□□□□ 0.75
PTCD2Q8WV60 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTCD2Q8WV60 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 AL121906.2-201ENST00000621597 723 ntBASIC19.71■□□□□ 0.75
PTCD2Q8WV60 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.71■□□□□ 0.75
PTCD2Q8WV60 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 BX323043.1-201ENST00000641006 1765 ntBASIC19.7■□□□□ 0.74
PTCD2Q8WV60 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms